Factsheet for TraesCS5B01G018200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G005860.1	Barley	cytosol	90.02	88.26
Zm00001d029523_P001	Maize	cytosol	68.42	74.51
OQU92401	Sorghum	cytosol	75.5	73.63
TraesCS7A01G499300.2	Wheat	cytosol	62.43	62.43
TraesCS6B01G008700.1	Wheat	cytosol	39.2	39.63
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	17.24	37.85
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	10.89	32.61
TraesCS2B01G031300.1	Wheat	cytosol	12.52	25.65
TraesCS2B01G031400.1	Wheat	cytosol	12.52	25.65
TraesCS2B01G031100.1	Wheat	plastid	25.59	24.87
TraesCS2B01G032300.2	Wheat	plastid	25.59	24.87
TraesCS2B01G030900.1	Wheat	plastid	20.87	24.36
TraesCS2B01G031600.1	Wheat	mitochondrion	22.87	24.23
TraesCS2B01G031000.1	Wheat	plastid	24.68	23.9
TraesCS7B01G407200.1	Wheat	cytosol	25.05	23.63
TraesCS2B01G031500.1	Wheat	plastid	22.5	23.26
TraesCS6B01G092000.1	Wheat	plastid	20.69	20.99
TraesCS6B01G091100.1	Wheat	plastid	20.33	20.36
TraesCS6B01G091200.1	Wheat	cytosol	6.17	20.0
TraesCS6B01G091300.1	Wheat	plastid	19.96	20.0
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	19.6	19.82
TraesCS6B01G090800.1	Wheat	plastid	19.42	19.49
TraesCS6B01G091700.1	Wheat	plastid	19.24	19.38
TraesCS6B01G091000.1	Wheat	cytosol	14.88	19.2
TraesCS6B01G091500.1	Wheat	plastid	19.06	19.06
TraesCS6B01G091400.1	Wheat	plastid	19.06	18.68
TraesCS6B01G092800.1	Wheat	plastid	18.51	18.58
TraesCS2B01G501400.1	Wheat	plastid	18.51	18.55
TraesCS6B01G090500.1	Wheat	plastid	18.15	17.92

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF7
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS5B01G018200	EnsemblPlants:TraesCS5B01G018200.1	TIGR:cd00684	:	:

Description

No Description!

Coordinates

chr5B:+:17718574..17728070

Molecular Weight (calculated)

64670.8 Da

IEP (calculated)

5.055

GRAVY (calculated)

-0.303

Length

551 amino acids

Sequence
(BLAST)

001: GGRVIAQGYT VLDERRHAVD YRLSVWGDYF IRNPTLPHTH QNSIEWMTER RDKLVLKARD KLLTLCDPLA ELKMIDALQR LGVSCHFKEE IDLKLHKLSS
101: QKFDCENLHV ISLQFRLLRQ DGCYMSSDVF QSFMENEENF EATMQSDVRA LLALYEAAHL GTPNEQFLKD AQKKTTSLLK SKVGHLEKPL ADKVKHALET
201: PCFRRMKILE ARLYIPLYQE DKEECNETLL ELAKLNFYLL QGLYREEVNK ICEWYYEKES SWKLFYARHR PAEAYFWALG VYYEPQYAKA RKFLAKFIAT
301: ITPYDDTFDN YGVWEELRPF ADVMQRWDMQ DVDQLGECYK DYARFMFGTM IEIENALPKD IATRNVNFIK NIINEVCKGY LTEIIWRDNN YIPPLEEHMK
401: VTLITCFYCA ISCTAFVVFE ENITEEVLQW MSKFPQIVKD SCIVSRLMDD IVAHEFETER NNVATAVTCY MKEYGTTKEV ASEALWEVVE NAWKDMNKEF
501: LSVTDIPSSL LIRVINLAGM METMYKEIDG YTDSAILKNR ISLLLEQPMT F

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.