Factsheet for TraesCS6B01G091300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G091100.1	Wheat	plastid	98.0	98.0
TraesCSU01G116700.1	Wheat	plastid	95.09	95.09
TraesCS6B01G091200.1	Wheat	cytosol	28.55	92.35
TraesCS6B01G090800.1	Wheat	plastid	88.91	89.07
HORVU6Hr1G012090.1	Barley	cytosol	61.09	88.65
TraesCS6B01G091000.1	Wheat	cytosol	68.18	87.82
TraesCS6B01G091500.1	Wheat	plastid	80.55	80.4
TraesCS6B01G092800.1	Wheat	plastid	80.0	80.15
TraesCS6B01G091400.1	Wheat	plastid	80.55	78.83
TraesCS2B01G501400.1	Wheat	plastid	78.55	78.55
TraesCS6B01G091700.1	Wheat	plastid	76.55	76.97
TraesCS6B01G090500.1	Wheat	plastid	75.64	74.55
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	65.82	66.42
EES04391	Sorghum	cytosol	48.91	64.51
TraesCS6B01G092000.1	Wheat	plastid	63.45	64.27
KXG29327	Sorghum	plastid	63.09	63.09
Zm00001d053918_P001	Maize	cytosol	32.55	62.59
Os10t0489500-00	Rice	cytosol	57.64	62.04
Zm00001d053916_P002	Maize	cytosol	50.18	62.02
EES04392	Sorghum	plastid	60.73	60.4
Os02t0121700-01	Rice	plastid	63.64	58.82
EES04390	Sorghum	plastid	59.64	58.16
EES04394	Sorghum	endoplasmic reticulum	61.64	56.97
Zm00001d015053_P001	Maize	plastid	59.27	56.11
Zm00001d015054_P001	Maize	plastid	56.91	54.53
Solyc10g005420.1.1	Tomato	cytosol	6.73	45.12
VIT_00s0372g00060.t01	Wine grape	cytosol	15.09	44.38
GSMUA_Achr2P03420_001	Banana	cytosol	38.36	43.78
GSMUA_Achr9P21010_001	Banana	cytosol	37.45	43.01
PGSC0003DMT400029275	Potato	cytosol	20.55	41.7
PGSC0003DMT400029354	Potato	cytosol	21.64	41.61
VIT_00s0271g00030.t01	Wine grape	cytosol	36.0	41.08
VIT_00s0572g00010.t01	Wine grape	cytosol	33.45	40.89
VIT_00s0372g00020.t01	Wine grape	cytosol	30.0	40.64
VIT_00s0266g00020.t01	Wine grape	cytosol	35.27	39.84
VIT_00s0271g00010.t01	Wine grape	cytosol	35.45	39.63
PGSC0003DMT400029266	Potato	cytosol	29.27	38.61
VIT_00s0372g00040.t01	Wine grape	cytosol	35.27	38.26
VIT_00s0266g00010.t01	Wine grape	cytosol	35.27	38.26
VIT_00s0572g00020.t01	Wine grape	cytosol	35.27	38.26
VIT_00s0847g00020.t01	Wine grape	cytosol	28.55	38.2
PGSC0003DMT400029265	Potato	cytosol	34.0	36.45
VIT_00s0266g00070.t01	Wine grape	cytosol	34.0	36.17
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	37.82	36.05
VIT_00s0385g00020.t01	Wine grape	cytosol	32.18	34.84
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.55	34.29
KRH21637	Soybean	cytosol	32.91	33.9
Solyc10g005390.2.1	Tomato	cytosol	34.0	33.21
KRH49914	Soybean	plastid	34.55	33.16
Solyc05g026590.1.1	Tomato	cytosol	16.55	31.71
KRH49915	Soybean	plastid	33.27	31.12
AT1G61680.1	Thale cress	plastid	31.64	30.58
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.45	30.23
Solyc10g005410.2.1	Tomato	plastid	34.55	30.21
KRH41974	Soybean	cytosol	15.82	29.9
TraesCS2B01G031400.1	Wheat	cytosol	13.45	27.51
TraesCS2B01G031300.1	Wheat	cytosol	13.45	27.51
TraesCS2B01G030900.1	Wheat	plastid	22.73	26.48
TraesCS2B01G031600.1	Wheat	mitochondrion	23.64	25.0
TraesCS2B01G031000.1	Wheat	plastid	25.64	24.78
TraesCS2B01G032300.2	Wheat	plastid	25.45	24.69
TraesCS2B01G031100.1	Wheat	plastid	25.45	24.69
TraesCS7B01G407200.1	Wheat	cytosol	25.82	24.32
TraesCS2B01G031500.1	Wheat	plastid	23.45	24.2
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	7.45	22.28
TraesCS6B01G008700.1	Wheat	cytosol	21.27	21.47
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	20.0	19.96

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	SignalP:SignalP-noTM	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G091300	EnsemblPlants:TraesCS6B01G091300.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:66942282..66945565

Molecular Weight (calculated)

63369.8 Da

IEP (calculated)

5.595

GRAVY (calculated)

-0.279

Length

550 amino acids

Sequence
(BLAST)

001: MAAAHVCFSF SSFAPLLHSA LPVARSGDQS GRNSGFFRPS PVIYPGREPV SHELSDDFDF QESLLNVQAL LHQHPKSNKG MLSTVDHLKH LCIDHYFQDE
101: IDNIMETSVD LLHSDDLLDA TLSLRLMREV GYYISADDVL QKFTNDNGDF NLRHSKDLRG LLSLHDMSHL NMGEASLYKA KEFSSKHLKF SLKYLEPNLA
201: RYVMKSLDHP YHVSLKQYKA RHHLSYLQNL PTMHTAIEKL ALVEFQMKKL QHQSEMQEVK RWWVDLGLSQ EIPAARDQVL KWYMWSMTIL EGFSFSRYRV
301: EATKVISMVY IVDDIFDLVA TQEELSLFNE AIKMWDLAAA ESLPSYMISC YKDLYTITND IADMVIKEHG LNPINHLKQA WATLFDGFMI EGKWLSTNQV
401: PTSEDYLRNG VITSGAPLLF MHLLFMLGHD LTEDNNDYIL RVISCPAKIM RLWDDMGSAK DELQEGLDGS YKDLYQRENP HADAEKHMLD MIAGEWEHLN
501: RECFSQTKST LPPSFIGASL NFARMVSIMY GYDDEQRLPA LEDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.