Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 3
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d053916_P002 | Maize | cytosol | 81.12 | 52.13 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 63.29 | 47.76 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 30.77 | 47.06 |
| KXG29327 | Sorghum | plastid | 84.62 | 44.0 |
| PGSC0003DMT400029275 | Potato | cytosol | 41.61 | 43.91 |
| Zm00001d015053_P001 | Maize | plastid | 77.97 | 38.38 |
| Zm00001d015054_P001 | Maize | plastid | 74.83 | 37.28 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 44.76 | 37.21 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 59.79 | 36.38 |
| PGSC0003DMT400029354 | Potato | cytosol | 35.66 | 35.66 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 53.15 | 35.6 |
| TraesCS6A01G067500.1 | Wheat | plastid | 61.89 | 34.71 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 60.49 | 33.99 |
| Os10t0489500-00 | Rice | cytosol | 58.74 | 32.88 |
| TraesCS6B01G091100.1 | Wheat | plastid | 62.94 | 32.73 |
| TraesCS6D01G065200.1 | Wheat | plastid | 62.24 | 32.66 |
| TraesCS6D01G048600.1 | Wheat | plastid | 62.24 | 32.66 |
| TraesCS6A01G067600.1 | Wheat | plastid | 62.59 | 32.55 |
| TraesCSU01G116600.1 | Wheat | plastid | 62.59 | 32.55 |
| TraesCS6B01G091300.1 | Wheat | plastid | 62.59 | 32.55 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 46.15 | 32.51 |
| TraesCS6B01G090500.1 | Wheat | plastid | 62.94 | 32.26 |
| TraesCS6B01G092800.1 | Wheat | plastid | 61.89 | 32.24 |
| TraesCS6A01G067800.1 | Wheat | plastid | 61.89 | 32.24 |
| TraesCSU01G116700.1 | Wheat | plastid | 61.89 | 32.18 |
| TraesCS6B01G091500.1 | Wheat | plastid | 61.89 | 32.12 |
| TraesCS6B01G090800.1 | Wheat | plastid | 61.54 | 32.06 |
| TraesCS6A01G067700.1 | Wheat | plastid | 61.54 | 32.0 |
| TraesCS6B01G091700.1 | Wheat | plastid | 60.84 | 31.81 |
| HORVU6Hr1G012270.1 | Barley | plastid | 60.14 | 31.62 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 60.14 | 31.56 |
| TraesCSU01G116900.1 | Wheat | plastid | 61.89 | 31.55 |
| TraesCS6D01G065100.1 | Wheat | plastid | 60.49 | 31.45 |
| HORVU6Hr1G012170.1 | Barley | plastid | 60.14 | 31.33 |
| TraesCS6B01G091400.1 | Wheat | plastid | 61.54 | 31.32 |
| TraesCS2B01G501400.1 | Wheat | plastid | 60.14 | 31.27 |
| TraesCS6B01G092000.1 | Wheat | plastid | 58.74 | 30.94 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 48.25 | 30.67 |
| Os02t0121700-01 | Rice | plastid | 62.94 | 30.25 |
| PGSC0003DMT400029266 | Potato | cytosol | 44.06 | 30.22 |
| TraesCS2D01G477300.1 | Wheat | plastid | 59.44 | 30.09 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 50.35 | 30.06 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 50.35 | 29.88 |
| HORVU6Hr1G012110.1 | Barley | plastid | 61.89 | 29.35 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 55.59 | 29.23 |
| Solyc10g005420.1.1 | Tomato | cytosol | 8.04 | 28.05 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 47.2 | 27.44 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 46.5 | 27.31 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 45.8 | 27.18 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 47.9 | 27.02 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 47.9 | 27.02 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 47.9 | 27.02 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 15.73 | 26.47 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 44.06 | 24.37 |
| PGSC0003DMT400029265 | Potato | cytosol | 43.71 | 24.37 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 14.34 | 24.12 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 33.92 | 23.6 |
| KRH49914 | Soybean | plastid | 46.5 | 23.21 |
| KRH21637 | Soybean | cytosol | 43.01 | 23.03 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 46.15 | 22.88 |
| AT1G61680.1 | Thale cress | plastid | 45.1 | 22.67 |
| KRH49915 | Soybean | plastid | 44.76 | 21.77 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 38.11 | 21.46 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 48.25 | 21.4 |
| Solyc10g005390.2.1 | Tomato | cytosol | 41.61 | 21.14 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 33.92 | 19.8 |
| Solyc10g005410.2.1 | Tomato | plastid | 38.81 | 17.65 |
| KRH41974 | Soybean | cytosol | 17.13 | 16.84 |
| Zm00001d018611_P001 | Maize | cytosol, extracellular, mitochondrion, peroxisome | 19.93 | 13.41 |
| Zm00001d004279_P001 | Maize | mitochondrion | 22.03 | 13.07 |
| Zm00001d029523_P001 | Maize | cytosol | 20.28 | 11.46 |
| Solyc05g026590.1.1 | Tomato | cytosol | 9.79 | 9.76 |
| Zm00001d047440_P001 | Maize | cytosol | 4.2 | 4.04 |
Protein Annotations
| EnsemblPlants:Zm00001d053918_P001 | EnsemblPlants:Zm00001d053918_T001 | EnsemblPlantsGene:Zm00001d053918 | EntrezGene:103654935 | Gene3D:1.10.600.10 | GO:GO:0000287 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:Isoprenoid_synthase_dom_sf | InterPro:Terpene_synthase_metal-bd | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 | PFAM:PF03936 | ProteinID:AQK60731.1 |
| SUPFAM:SSF48576 | UniParc:UPI000220E75D | UniProt:K7U8C7 | MapMan:9.1.4.2 | : | : |
Description
S-(+)-linalool synthase chloroplastic
Coordinates
chr4:+:243641011..243642284
Molecular Weight (calculated)
32944.7 Da
IEP (calculated)
4.840
GRAVY (calculated)
-0.111
Length
286 amino acids
Sequence
(BLAST)
(BLAST)
001: MPQGTLPCYE CRVLKWYMWS MTALQGSSFS RFRVEMTKII SLVYVVDDIF DFVGTLEELS LFTEAVKMWD TVAADSLPSY MRSCYNALYT ITNEIAEMAE
101: KKHGLNSINH LRKAWATLFD GFMVEARWLA IDQVPTAEDY LRNGVVTSGV PLTFVHIFTL MGCEQSIEAL IDQMPSVISC PAKILRLQDD MGSAKDEAQE
201: GFDGSYRDFY LKENPRCNRN DAEAHMRSLI AREWEELNRE CLYTRTFSSN CTRVCLNTAR MIGVMYSYNK EQRLLVLEDY AKMLIL
101: KKHGLNSINH LRKAWATLFD GFMVEARWLA IDQVPTAEDY LRNGVVTSGV PLTFVHIFTL MGCEQSIEAL IDQMPSVISC PAKILRLQDD MGSAKDEAQE
201: GFDGSYRDFY LKENPRCNRN DAEAHMRSLI AREWEELNRE CLYTRTFSSN CTRVCLNTAR MIGVMYSYNK EQRLLVLEDY AKMLIL
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.