Factsheet for HORVU6Hr1G088610.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	89.0	83.12
HORVU6Hr1G012090.1	Barley	cytosol	52.85	70.98
EES04391	Sorghum	cytosol	52.65	64.27
HORVU6Hr1G012270.1	Barley	plastid	67.98	63.6
HORVU6Hr1G012170.1	Barley	plastid	66.8	61.93
Os10t0489500-00	Rice	cytosol	61.1	60.86
Zm00001d053918_P001	Maize	cytosol	33.99	60.49
Zm00001d053916_P002	Maize	cytosol	52.85	60.45
KXG29327	Sorghum	plastid	63.06	58.36
HORVU6Hr1G012110.1	Barley	plastid	67.39	56.88
EES04392	Sorghum	plastid	61.49	56.6
EES04390	Sorghum	plastid	61.1	55.14
Os02t0121700-01	Rice	plastid	63.06	53.95
Zm00001d015053_P001	Maize	plastid	61.3	53.7
Zm00001d015054_P001	Maize	plastid	59.53	52.79
EES04394	Sorghum	endoplasmic reticulum	61.3	52.44
VIT_00s0372g00060.t01	Wine grape	cytosol	17.68	48.13
Solyc10g005420.1.1	Tomato	cytosol	7.66	47.56
PGSC0003DMT400029275	Potato	cytosol	23.97	45.02
GSMUA_Achr2P03420_001	Banana	cytosol	42.04	44.4
VIT_00s0372g00020.t01	Wine grape	cytosol	34.97	43.84
PGSC0003DMT400029354	Potato	cytosol	24.56	43.71
VIT_00s0266g00020.t01	Wine grape	cytosol	40.67	42.51
VIT_00s0271g00010.t01	Wine grape	cytosol	41.06	42.48
GSMUA_Achr9P21010_001	Banana	cytosol	39.88	42.38
VIT_00s0572g00010.t01	Wine grape	cytosol	36.94	41.78
VIT_00s0271g00030.t01	Wine grape	cytosol	39.49	41.7
VIT_00s0847g00020.t01	Wine grape	cytosol	32.22	39.9
PGSC0003DMT400029266	Potato	cytosol	32.61	39.81
VIT_00s0372g00040.t01	Wine grape	cytosol	39.49	39.65
VIT_00s0266g00010.t01	Wine grape	cytosol	39.49	39.65
VIT_00s0572g00020.t01	Wine grape	cytosol	39.29	39.45
VIT_00s0266g00070.t01	Wine grape	cytosol	39.49	38.88
PGSC0003DMT400029265	Potato	cytosol	38.11	37.82
VIT_00s0385g00020.t01	Wine grape	cytosol	36.35	36.42
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	40.47	35.7
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	33.99	35.31
KRH49914	Soybean	plastid	37.72	33.51
Solyc10g005390.2.1	Tomato	cytosol	36.94	33.39
KRH21637	Soybean	cytosol	34.97	33.33
KRH41974	Soybean	cytosol	18.66	32.65
KRH49915	Soybean	plastid	36.74	31.8
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	39.49	31.16
Solyc05g026590.1.1	Tomato	cytosol	17.09	30.31
AT1G61680.1	Thale cress	plastid	33.2	29.7
Solyc10g005410.2.1	Tomato	plastid	35.56	28.78
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	28.29	24.37
HORVU2Hr1G003390.1	Barley	plastid	27.9	23.91
HORVU2Hr1G003360.2	Barley	plastid	26.92	23.83
HORVU2Hr1G003420.1	Barley	plastid	25.74	23.1
HORVU7Hr1G122730.1	Barley	cytosol	22.2	22.38
HORVU5Hr1G005860.1	Barley	cytosol	23.18	21.0
HORVU5Hr1G004510.1	Barley	cytosol	7.47	18.81

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A287V3F6	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:HORVU6Hr1G088610	EnsemblPlants:HORVU6Hr1G088610.2	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B460109
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr6H:+:566975280..566980599

Molecular Weight (calculated)

59082.5 Da

IEP (calculated)

5.662

GRAVY (calculated)

-0.363

Length

509 amino acids

Sequence
(BLAST)

001: MADTCSSGSH RQQQQQLRWX GLESVKAMLH QNHKNKREVL TTIDNLKRLC VDHYFQDEID NAVDSCLDLV HSDDLLEATL SLRLAREARY DISADEVLRK
101: FTDHNGDFKL DHCEDIRGLL SLHDISHLNM GESSLYKAKE FSRKNLTSAI RHLNPNLARH VRHSLDHPYH VSLMQYKARY HLSYLQSLPT RNTAMEELAV
201: AEFYLNKLQH QKEMREVERW WMDLGLTREI RTARDQVLKW YMWAMTVVQG FSLSRYRIEI TKIISFVYIV DDIFDLVGTQ EELSLFSEAI KRWDLAAVGS
301: LPSYMLSCYK ALYTVTNEIA DVAKKEHGMN PISQLRNAWE TLFDGFLLER KWLSSNQVPS PEDYLRNGII TSGVPLIFLH LFFMLGHDLT ELDGDNIPRV
401: IYCSATIVRL RDDMGSAKDE MQEGFDGSYK EMYLRENPHG DAEEHMLEMI ADEWEELNRE CFSRARSSCL SPSFLLASLN LARMTSIIYG YDNEQRLPVL
501: EDYIGMLLL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.