Factsheet for HORVU2Hr1G003390.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G003420.1	Barley	plastid	67.51	70.72
HORVU2Hr1G003360.2	Barley	plastid	67.17	69.39
Zm00001d004279_P001	Maize	mitochondrion	42.42	52.28
OQU81208	Sorghum	mitochondrion, plastid	51.18	52.14
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	39.9	40.1
VIT_00s0392g00030.t01	Wine grape	cytosol	20.37	38.17
VIT_00s0361g00060.t01	Wine grape	cytosol	34.01	35.69
VIT_00s0392g00060.t01	Wine grape	cytosol	23.91	33.89
KRH22759	Soybean	cytosol	30.98	32.39
PGSC0003DMT400095524	Potato	cytosol	23.91	32.27
Solyc03g007730.1.1	Tomato	cytosol	30.3	32.03
KRH55947	Soybean	cytosol	17.34	31.89
Solyc02g079890.1.1	Tomato	cytosol, plastid	29.29	31.81
KRH26550	Soybean	cytosol	22.22	31.43
HORVU5Hr1G004510.1	Barley	cytosol	9.76	28.71
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	23.91	27.9
HORVU6Hr1G012270.1	Barley	plastid	24.41	26.65
HORVU7Hr1G122730.1	Barley	cytosol	22.39	26.34
HORVU6Hr1G012090.1	Barley	cytosol	16.67	26.12
HORVU6Hr1G012170.1	Barley	plastid	23.91	25.87
HORVU6Hr1G012110.1	Barley	plastid	24.24	23.88
HORVU5Hr1G005860.1	Barley	cytosol	22.56	23.84

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872
EnsemblPlantsGene:HORVU2Hr1G003390	EnsemblPlants:HORVU2Hr1G003390.1	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	UniProt:M0XRL6
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239	SUPFAM:SSF48576
SignalP:SignalP-noTM	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI00029690BD	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr2H:-:7488976..7492255

Molecular Weight (calculated)

67314.3 Da

IEP (calculated)

5.752

GRAVY (calculated)

-0.399

Length

594 amino acids

Sequence
(BLAST)

001: MFCGTMAWQF LPTMATASKC LWQTSSPRTT VRCSSSSWSS PTPPARRSAN YPPSSWDYDS LLCSLDDGSH DTHDQITRAR LDGLRARSFE KLKAGVRERL
101: MVISGSDDQP AKLRLVDTLQ RLGIAYHFHD EITDILTTIH SSCDEDDADD VASAALRFRL LRDSGFPVFF PAESLKNLNH ILEDVKGLLS VYEASYLAFG
201: GEETLDEAKA FSIDALRELL PSMDHQVQQS VVHALDLPLH RRSPRLEARW FIDHYASDVT NSDPSLLGFA TIDFNHVQSV HQQELVRLVR WRKDIALGDK
301: LGFARDRLME CYHYANGIVW EPNQGACRES LARVVYLSVQ LDDVYDVYGT LDELILFTDA IRRWEECADE RLPEYMKALY TIMYNTSGEV AENVLKQHGC
401: DVRHVLQKVW GDLTKSYLVE AKWHHENHRP TLQEYLDNGS VSSTGPLLLQ HVFPLLSTEE KLTSESLDKV GRYPRLVQYA SLIVRLCNDS ATHSAELQRG
501: DAPSSIAIHM SENNSGEKKS RKAMEDLIVD AWKSINVEAS ENCKFSGHFA KTCVNLARIS HCVYQGGDGF GEPDYQKKRQ IRELFLEPIS SEKE

Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.