Factsheet for HORVU6Hr1G012110.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G065100.1	Wheat	plastid	82.59	90.55
TraesCS6B01G091500.1	Wheat	plastid	81.76	89.47
TraesCS6B01G091400.1	Wheat	plastid	81.09	87.01
HORVU6Hr1G012170.1	Barley	plastid	76.12	83.61
HORVU6Hr1G012090.1	Barley	cytosol	50.58	80.47
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	56.88	67.39
HORVU6Hr1G012270.1	Barley	plastid	58.87	65.26
EES04391	Sorghum	cytosol	44.94	64.99
Zm00001d053918_P001	Maize	cytosol	29.35	61.89
KXG29327	Sorghum	plastid	56.38	61.82
Os10t0489500-00	Rice	cytosol	52.07	61.45
Zm00001d053916_P002	Maize	cytosol	44.78	60.67
EES04392	Sorghum	plastid	54.89	59.86
EES04390	Sorghum	plastid	54.56	58.33
Os02t0121700-01	Rice	plastid	56.55	57.31
EES04394	Sorghum	endoplasmic reticulum	56.05	56.81
Zm00001d015053_P001	Maize	plastid	53.73	55.77
Zm00001d015054_P001	Maize	plastid	51.91	54.53
Solyc10g005420.1.1	Tomato	cytosol	6.63	48.78
GSMUA_Achr2P03420_001	Banana	cytosol	37.81	47.3
VIT_00s0372g00060.t01	Wine grape	cytosol	14.59	47.06
PGSC0003DMT400029275	Potato	cytosol	20.73	46.13
GSMUA_Achr9P21010_001	Banana	cytosol	36.48	45.93
PGSC0003DMT400029354	Potato	cytosol	21.56	45.45
VIT_00s0572g00010.t01	Wine grape	cytosol	32.34	43.33
VIT_00s0271g00030.t01	Wine grape	cytosol	34.33	42.95
VIT_00s0372g00020.t01	Wine grape	cytosol	28.86	42.86
PGSC0003DMT400029266	Potato	cytosol	29.52	42.69
VIT_00s0266g00020.t01	Wine grape	cytosol	34.33	42.51
VIT_00s0271g00010.t01	Wine grape	cytosol	34.33	42.07
VIT_00s0847g00020.t01	Wine grape	cytosol	27.69	40.63
VIT_00s0572g00020.t01	Wine grape	cytosol	34.16	40.63
VIT_00s0372g00040.t01	Wine grape	cytosol	34.16	40.63
VIT_00s0266g00010.t01	Wine grape	cytosol	34.16	40.63
PGSC0003DMT400029265	Potato	cytosol	34.0	39.96
VIT_00s0266g00070.t01	Wine grape	cytosol	33.17	38.68
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	36.15	37.78
VIT_00s0385g00020.t01	Wine grape	cytosol	31.01	36.81
Solyc10g005390.2.1	Tomato	cytosol	34.0	36.41
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	29.19	35.92
Solyc05g026590.1.1	Tomato	cytosol	16.42	34.49
KRH49914	Soybean	plastid	32.67	34.38
KRH21637	Soybean	cytosol	30.35	34.27
KRH49915	Soybean	plastid	31.68	32.48
Solyc10g005410.2.1	Tomato	plastid	33.83	32.43
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	34.49	32.25
KRH41974	Soybean	cytosol	15.26	31.62
AT1G61680.1	Thale cress	plastid	29.19	30.93
HORVU2Hr1G003420.1	Barley	plastid	24.21	25.75
HORVU2Hr1G003360.2	Barley	plastid	24.38	25.57
HORVU2Hr1G003390.1	Barley	plastid	23.88	24.24
HORVU7Hr1G111960.3	Barley	cytosol, nucleus, peroxisome	23.71	24.2
HORVU5Hr1G004510.1	Barley	cytosol	6.8	20.3
HORVU7Hr1G122730.1	Barley	cytosol	16.75	20.0
HORVU5Hr1G005860.1	Barley	cytosol	18.08	19.39

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A287TBY1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	EnsemblPlantsGene:HORVU6Hr1G012110	EnsemblPlants:HORVU6Hr1G012110.1	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576
InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000B471976

Description

No Description!

Coordinates

chrchr6H:-:22894582..22904676

Molecular Weight (calculated)

68856.2 Da

IEP (calculated)

6.230

GRAVY (calculated)

-0.281

Length

603 amino acids

Sequence
(BLAST)

001: MHCSYPPSIQ RQSGSSLFIS YHAGIVSKLT SLLSRSVTRH TLASQPPLIQ KPMAATHAFF SFSSVEPVLQ YSASPVAGNG GWSGRNRGFF RPLTVICPGR
101: EPASDELSDD FNFQESLTNV QALLHHHPMT RRGLLTTVDH LKRLCIDHYF QDEIDTIVGS CTDLIDGDDL LDATLSLRLM REAGYCVSAD NVLRKFANDD
201: GDFNLGLSKD IRGLLSLQDM SYLNMGESSL YKANEFSSKH LRFACKYLEP NLARYVRRSL DHPYHVSLMQ YKARHHLSYL QNLPTRNMAI ENLARAEFHN
301: KKLQHQREMQ EVQRWWMDLG LAQDVPAARD QVLKWYMWPM TLLEDFSFSR YRIEVTKIIS IVYIVDDIFD LVATQEELSL FNEAVKTWDL AAADSLPNYM
401: ISCYKALYTI TNDIADMARK EHGANPINHL KKAWATLFDG FMIEGKWLST NRVPTSDDYL RNGIITSGAP LVLLHIFFML GHDLTEGNKD NIHPVISCPA
501: KIMRLWDDLG SAKDESQEGL DGSYRELYQR ENPHGDADEH MLEMIAGEWE CLNKECFSGI KSTLSHSFIA ASLNFARMVR VMYSYDDEQK LPILEDYTRM
601: LLL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.