Factsheet for TraesCS6D01G065100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G091500.1	Wheat	plastid	94.0	93.83
TraesCS6B01G091400.1	Wheat	plastid	92.91	90.93
TraesCS6D01G065200.1	Wheat	plastid	85.64	86.42
TraesCS6D01G048600.1	Wheat	plastid	85.27	86.06
HORVU6Hr1G012110.1	Barley	plastid	90.55	82.59
TraesCS2D01G477300.1	Wheat	plastid	80.73	78.58
EES04391	Sorghum	cytosol	50.18	66.19
TraesCS7D01G540300.1	Wheat	cytosol, plastid	63.82	64.52
Os10t0489500-00	Rice	cytosol	59.27	63.8
KXG29327	Sorghum	plastid	62.36	62.36
Zm00001d053916_P002	Maize	cytosol	49.45	61.12
Zm00001d053918_P001	Maize	cytosol	31.45	60.49
EES04392	Sorghum	plastid	60.73	60.4
EES04390	Sorghum	plastid	60.91	59.4
Os02t0121700-01	Rice	plastid	64.0	59.16
EES04394	Sorghum	endoplasmic reticulum	60.73	56.13
Zm00001d015053_P001	Maize	plastid	58.73	55.59
Zm00001d015054_P001	Maize	plastid	56.36	54.01
Solyc10g005420.1.1	Tomato	cytosol	7.45	50.0
GSMUA_Achr2P03420_001	Banana	cytosol	40.36	46.06
GSMUA_Achr9P21010_001	Banana	cytosol	39.64	45.51
PGSC0003DMT400029354	Potato	cytosol	23.09	44.41
VIT_00s0372g00060.t01	Wine grape	cytosol	15.09	44.38
PGSC0003DMT400029275	Potato	cytosol	21.82	44.28
VIT_00s0572g00010.t01	Wine grape	cytosol	34.0	41.56
VIT_00s0271g00030.t01	Wine grape	cytosol	36.36	41.49
VIT_00s0372g00020.t01	Wine grape	cytosol	30.55	41.38
PGSC0003DMT400029266	Potato	cytosol	31.09	41.01
VIT_00s0266g00020.t01	Wine grape	cytosol	36.18	40.86
VIT_00s0271g00010.t01	Wine grape	cytosol	36.18	40.45
VIT_00s0372g00040.t01	Wine grape	cytosol	35.82	38.86
VIT_00s0572g00020.t01	Wine grape	cytosol	35.82	38.86
VIT_00s0266g00010.t01	Wine grape	cytosol	35.82	38.86
PGSC0003DMT400029265	Potato	cytosol	36.18	38.79
VIT_00s0847g00020.t01	Wine grape	cytosol	28.91	38.69
VIT_00s0266g00070.t01	Wine grape	cytosol	34.91	37.14
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.36	36.57
VIT_00s0385g00020.t01	Wine grape	cytosol	33.09	35.83
Solyc10g005390.2.1	Tomato	cytosol	36.18	35.35
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.09	34.9
Solyc05g026590.1.1	Tomato	cytosol	18.0	34.49
KRH49914	Soybean	plastid	34.73	33.33
KRH21637	Soybean	cytosol	32.18	33.15
Solyc10g005410.2.1	Tomato	plastid	36.0	31.48
KRH49915	Soybean	plastid	33.64	31.46
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.18	30.85
AT1G61680.1	Thale cress	plastid	30.91	29.88
KRH41974	Soybean	cytosol	15.64	29.55
TraesCS7D01G487700.2	Wheat	cytosol	21.45	27.06
TraesCS2D01G023600.1	Wheat	plastid	25.09	24.17
TraesCS2D01G023800.1	Wheat	plastid	25.45	23.93
TraesCS2D01G023100.1	Wheat	plastid	24.36	23.72

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6D01G065100	EnsemblPlants:TraesCS6D01G065100.1	SEG:seg	:

Description

No Description!

Coordinates

chr6D:-:31751425..31755266

Molecular Weight (calculated)

63152.4 Da

IEP (calculated)

6.111

GRAVY (calculated)

-0.287

Length

550 amino acids

Sequence
(BLAST)

001: MAAAHAFFFF SSVEPVLHSV SLVAGNGGRS GRNHGFFRPS TVICPGREPA SHGLSDDFDF QESLTNVQAL LHHHPTSGRG LLTTVDHLKR LCIYHYFQDE
101: IDTIVDSCAD LIHGDDLLDA TLSLRLMREA GYCVSADDVL RKFAHDNGDF NLGLSKDIRG LLSLQDMSHL NMGESSLYKA NEFSSRHLRF AIKYLEPNLA
201: RYVRQSLDHP YHVSLMQYKA RHHLSYMQNL PTRNMAIENL ARAEFQIKKL QHQREMQEVK RWWMDLGLAQ DVPAARDQVL KWYMWPMTVL EGFSFSRYRI
301: EITKIISIVY IVDDIFDLVA TQEELSLFNE AIKMWDLEAA DSLPNYMISC YKALYTTTND IADMARKEHG ANPINHLKKA WATLFDGFMI EGKWLSTNNV
401: PTSEDYIRNG IITSGAPLVF LHLLFMLGHD LTEGNKDNIH RVISCPAKIM RLWDDMGSAK DESQEGLDGS YKELYQRENP HGDADEHMVE MIASEWECLN
501: KECFSRMKST LSHSFITASL NFARMVRVMY GYDDEQKLPI LEDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.