Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G023600.1 | Wheat | plastid | 94.51 | 93.52 |
| TraesCS2B01G031400.1 | Wheat | cytosol | 44.42 | 93.31 |
| TraesCS2B01G031300.1 | Wheat | cytosol | 44.25 | 92.94 |
| TraesCS2B01G031500.1 | Wheat | plastid | 85.49 | 90.62 |
| TraesCS2B01G031000.1 | Wheat | plastid | 90.62 | 89.98 |
| HORVU2Hr1G003420.1 | Barley | plastid | 85.49 | 85.19 |
| TraesCS2D01G023800.1 | Wheat | plastid | 67.61 | 65.3 |
| Zm00001d004279_P001 | Maize | mitochondrion | 45.31 | 53.11 |
| OQU81208 | Sorghum | mitochondrion, plastid | 54.34 | 52.66 |
| TraesCS7D01G487700.2 | Wheat | cytosol | 33.63 | 43.58 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 21.77 | 38.8 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 35.93 | 35.87 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 24.6 | 33.17 |
| KRH55947 | Soybean | cytosol | 18.41 | 32.2 |
| KRH22759 | Soybean | cytosol | 31.68 | 31.51 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 30.09 | 31.08 |
| KRH26550 | Soybean | cytosol | 22.83 | 30.71 |
| PGSC0003DMT400095524 | Potato | cytosol | 23.72 | 30.45 |
| Solyc03g007730.1.1 | Tomato | cytosol | 30.09 | 30.25 |
| TraesCS6D01G048600.1 | Wheat | plastid | 23.89 | 24.77 |
| TraesCS6D01G065200.1 | Wheat | plastid | 23.89 | 24.77 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 23.54 | 24.45 |
| TraesCS6D01G065100.1 | Wheat | plastid | 23.72 | 24.36 |
| TraesCS2D01G477300.1 | Wheat | plastid | 24.07 | 24.07 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | EnsemblPlantsGene:TraesCS2D01G023100 | EnsemblPlants:TraesCS2D01G023100.1 | TIGR:cd00684 | SEG:seg | : |
Description
No Description!
Coordinates
chr2D:-:10432633..10435056
Molecular Weight (calculated)
63956.6 Da
IEP (calculated)
6.362
GRAVY (calculated)
-0.408
Length
565 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWQLQQTMA TMSTCFRTSS PATVRCAAAA RRSANYAPSS WDYDSLLQLS PNNGGQVDKL KAGVRERLVA ASRGDHQAAK LGLVDTVQRL GIAYHFEEEI
101: AGILSSVHRK PHRCSGDDCD VASTALRFRL LRDSCFPVYY PPEFLEDLKR GPDDDVKGLL SLYEASYLAF EGEEALDEAR AFSKKALIKL LPSMDHHLRR
201: SVVRSLDLPL HRRSPRLEAR WFIDHYARDE SNSDPLLVRF ATTDFNNVQS VHQEELVRLA RWWKGTALSE KLGFARDRLM ECFHYANGTV WEPNNGACRE
301: VLAKVANLIV HLDDVYDVYG TLDELVLFTD AIGRWEESPS ERLPEYMQAL YSVMYNTSAE VAENVLEQHG CDARHVLQKA WRDMAESFLV EAKWHHGNHR
401: PTLREYLDNG SISASAPLLL QHTFPLLRVD EKITPMSLAK VGSYPRLVQS ASLVLRLCND SATHSAELER GDAPSSIAIH MSENSSSEQE SREAMEDLTM
501: EAWKSINEDA FKHCRFSRSF AKTCVNLARI SHCVYQGGDG FGAPDSRKKK QIRELFLDPF MIEEH
101: AGILSSVHRK PHRCSGDDCD VASTALRFRL LRDSCFPVYY PPEFLEDLKR GPDDDVKGLL SLYEASYLAF EGEEALDEAR AFSKKALIKL LPSMDHHLRR
201: SVVRSLDLPL HRRSPRLEAR WFIDHYARDE SNSDPLLVRF ATTDFNNVQS VHQEELVRLA RWWKGTALSE KLGFARDRLM ECFHYANGTV WEPNNGACRE
301: VLAKVANLIV HLDDVYDVYG TLDELVLFTD AIGRWEESPS ERLPEYMQAL YSVMYNTSAE VAENVLEQHG CDARHVLQKA WRDMAESFLV EAKWHHGNHR
401: PTLREYLDNG SISASAPLLL QHTFPLLRVD EKITPMSLAK VGSYPRLVQS ASLVLRLCND SATHSAELER GDAPSSIAIH MSENSSSEQE SREAMEDLTM
501: EAWKSINEDA FKHCRFSRSF AKTCVNLARI SHCVYQGGDG FGAPDSRKKK QIRELFLDPF MIEEH
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.