Factsheet for Zm00001d004279_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 2
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU81208	Sorghum	mitochondrion, plastid	80.71	66.72
TraesCS2B01G031400.1	Wheat	cytosol	28.42	50.93
TraesCS2B01G031300.1	Wheat	cytosol	28.42	50.93
TraesCS2B01G031600.1	Wheat	mitochondrion	52.49	48.65
TraesCS2A01G022400.1	Wheat	plastid	54.36	46.21
HORVU2Hr1G003420.1	Barley	plastid	53.94	45.86
TraesCS2B01G031000.1	Wheat	plastid	53.94	45.69
TraesCS2D01G023100.1	Wheat	plastid	53.11	45.31
TraesCS2D01G023600.1	Wheat	plastid	53.53	45.18
TraesCS2B01G032300.2	Wheat	plastid	52.7	44.8
TraesCS2B01G031500.1	Wheat	plastid	49.38	44.65
HORVU2Hr1G003360.2	Barley	plastid	52.7	44.17
TraesCS2B01G031100.1	Wheat	plastid	51.87	44.09
TraesCS2B01G030900.1	Wheat	plastid	42.95	43.86
TraesCS2A01G022300.1	Wheat	plastid	53.53	43.36
HORVU2Hr1G003390.1	Barley	plastid	52.28	42.42
TraesCS2A01G022600.1	Wheat	plastid	50.62	42.29
TraesCS2D01G023800.1	Wheat	plastid	51.04	42.05
TraesCSU01G238200.1	Wheat	plastid	32.16	39.44
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	32.57	36.94
VIT_00s0392g00030.t01	Wine grape	cytosol	22.61	34.38
VIT_00s0361g00060.t01	Wine grape	cytosol	35.68	30.39
VIT_00s0392g00060.t01	Wine grape	cytosol	25.93	29.83
KRH55947	Soybean	cytosol	19.29	28.79
Solyc02g079890.1.1	Tomato	cytosol, plastid	32.57	28.7
KRH22759	Soybean	cytosol	32.37	27.46
KRH26550	Soybean	cytosol	23.65	27.14
PGSC0003DMT400095524	Potato	cytosol	24.27	26.59
Solyc03g007730.1.1	Tomato	cytosol	30.5	26.16
Zm00001d053916_P002	Maize	cytosol	20.95	22.7
Zm00001d029523_P001	Maize	cytosol	23.24	22.13
Zm00001d053918_P001	Maize	cytosol	13.07	22.03
Zm00001d047440_P001	Maize	cytosol	12.66	20.54
Zm00001d015053_P001	Maize	plastid	23.86	19.79
Zm00001d015054_P001	Maize	plastid	23.24	19.51

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A1D6EEQ1	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	ProteinID:ONM18692.1	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0008453CF3	EnsemblPlantsGene:Zm00001d004279	EnsemblPlants:Zm00001d004279_P001
EnsemblPlants:Zm00001d004279_T001	:	:	:	:	:

Description

18-cineole synthase 1 chloroplastic

Coordinates

chr2:-:99777895..99783642

Molecular Weight (calculated)

55837.5 Da

IEP (calculated)

7.102

GRAVY (calculated)

-0.214

Length

482 amino acids

Sequence
(BLAST)

001: MMQVHPSSYY KMKRRIRDML LKKVEPSSKL QTIDAMQRLG ISYHFEDEIS NILYSISNES TKAQYTYDNI AFTALKFRLL RENGFPTILG PLGYHNYEKF
101: ITKTPSLEDA NTLLLLYEAS YLAFGDEEKL DVARTFSAKA LKQLMPFMLP HLREGVAHSL ELPLHWRASR LETRWFIDYY ARDRNMCPLL LQFAELDFNQ
201: VQYEHQKDLA VVTRWWKKIG LGEKLPFARD RLMECFHYAN GIVWDPKLGT CRQMLAKVSN LIVYLDDLYD VYGTIEELVL FTNAIARFDL LEWHLTCSWY
301: DICLAFLVEA KWHHGNYRPS IQKYLENGWV SSSAPLLLLH AFAMLDSVVN MSTISPLQTK LRLVQHVSLI LRLCNDSATH LDELGRGDAP SFIALHMIEN
401: GGNENDSRKA MQEHILKSWK VINEEAFDSC QYSMPFNKAC IDLARISHCV YQGGDGFGTP NGLKKKQIRD LFLDPIDICN KQ

Best Arabidopsis Sequence Match ( AT3G25810.1 )
(BLAST)

001: MATLCIGSAP IYQNACIHNF RLQRPRRFIS KSMTKTMPDA NPLDLRRRSG NYQPSSWDHS YLLSIENKYV NEKEVITRHV LKKKVKKMLE EVETKSRLEK
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD

Arabidopsis Description

TPS24Beta-myrcene/(E)-beta-ocimene synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.