Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G023600.1 | Wheat | plastid | 89.95 | 89.32 |
| TraesCS2B01G032300.2 | Wheat | plastid | 88.71 | 88.71 |
| HORVU2Hr1G003420.1 | Barley | plastid | 85.36 | 85.36 |
| TraesCS2B01G031600.1 | Wheat | mitochondrion | 77.42 | 84.42 |
| TraesCS2A01G022300.1 | Wheat | plastid | 79.89 | 76.13 |
| TraesCS2A01G022600.1 | Wheat | plastid | 66.31 | 65.16 |
| Zm00001d004279_P001 | Maize | mitochondrion | 46.21 | 54.36 |
| OQU81208 | Sorghum | mitochondrion, plastid | 54.85 | 53.34 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 22.05 | 39.43 |
| TraesCS7A01G500100.1 | Wheat | cytosol | 41.45 | 38.84 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 35.98 | 36.04 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 24.52 | 33.17 |
| KRH55947 | Soybean | cytosol | 17.99 | 31.58 |
| KRH22759 | Soybean | cytosol | 31.22 | 31.16 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 29.63 | 30.71 |
| KRH26550 | Soybean | cytosol | 22.22 | 30.0 |
| Solyc03g007730.1.1 | Tomato | cytosol | 29.45 | 29.72 |
| PGSC0003DMT400095524 | Potato | cytosol | 22.93 | 29.55 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 22.22 | 26.81 |
| TraesCS6A01G067500.1 | Wheat | plastid | 23.99 | 26.67 |
| TraesCS6A01G067600.1 | Wheat | plastid | 24.87 | 25.64 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 15.52 | 25.58 |
| TraesCS6A01G067800.1 | Wheat | plastid | 24.52 | 25.32 |
| TraesCS7A01G499300.2 | Wheat | cytosol | 24.16 | 24.86 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 7.41 | 24.71 |
| TraesCS6A01G067700.1 | Wheat | plastid | 23.81 | 24.55 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | EnsemblPlantsGene:TraesCS2A01G022400 | EnsemblPlants:TraesCS2A01G022400.1 | TIGR:cd00684 | : | : |
Description
No Description!
Coordinates
chr2A:-:10843519..10845920
Molecular Weight (calculated)
63744.4 Da
IEP (calculated)
7.024
GRAVY (calculated)
-0.389
Length
567 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWQLQQTMA TASTSFGTSL PATVRCSAAA RRSANYAPSS WDYDSLLQLS PNNGGQADQV DKLKAGVRER LVAANRGDHL AAKLGLVDTV QRLGIAYHFE
101: EEIASILTSV HRKPHCCSWD DGYVASTALR FRLLRDSGFP VYFPQGSLKT LKRGSDDVNG LLSLYKASYL AVGGEETLDE ARAFSKKALI KLLPSMDHHL
201: RRSVVRSLDL PLHRRSPRLE ARWFIDHYAR DDSSSDPLLI RLATTDYNNV QSVHQEELAR LARWWKGTGL SEKLGFARDR LMECFHYATG IVWEPNNGAC
301: REVLAKVANL IVHLDDVYDV YGTLDELVLF TDAIGRWEES PSERLPEYMQ ALYSVMYNTS AEVAENVLEQ HGCDTRHVLQ KAWRDMVESF LVEAKWHHGN
401: HRPTLHEYLD NGSISSSAPL LLQHAFPLLP MDEKLIPKSL AKVGSYPKLV QSASLVLRLC NDSATHSAEL ERGDAPSSIA IHMSENGSSE QESRKAMEDL
501: TMEAWKSINE DAFKHCQSSR FFAKTCVNLA RISHCVYQGG DGFGAPNDQK KKQIRELFLY SFTREKH
101: EEIASILTSV HRKPHCCSWD DGYVASTALR FRLLRDSGFP VYFPQGSLKT LKRGSDDVNG LLSLYKASYL AVGGEETLDE ARAFSKKALI KLLPSMDHHL
201: RRSVVRSLDL PLHRRSPRLE ARWFIDHYAR DDSSSDPLLI RLATTDYNNV QSVHQEELAR LARWWKGTGL SEKLGFARDR LMECFHYATG IVWEPNNGAC
301: REVLAKVANL IVHLDDVYDV YGTLDELVLF TDAIGRWEES PSERLPEYMQ ALYSVMYNTS AEVAENVLEQ HGCDTRHVLQ KAWRDMVESF LVEAKWHHGN
401: HRPTLHEYLD NGSISSSAPL LLQHAFPLLP MDEKLIPKSL AKVGSYPKLV QSASLVLRLC NDSATHSAEL ERGDAPSSIA IHMSENGSSE QESRKAMEDL
501: TMEAWKSINE DAFKHCQSSR FFAKTCVNLA RISHCVYQGG DGFGAPNDQK KKQIRELFLY SFTREKH
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.