Factsheet for TraesCS6A01G067800.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G092800.1	Wheat	plastid	91.8	91.8
TraesCS6D01G065200.1	Wheat	plastid	90.71	91.38
TraesCS6D01G048600.1	Wheat	plastid	90.35	91.01
HORVU6Hr1G012170.1	Barley	plastid	90.71	90.71
TraesCS6B01G091700.1	Wheat	plastid	89.8	90.13
TraesCS6A01G067700.1	Wheat	plastid	84.34	84.18
TraesCS2A01G478100.1	Wheat	cytosol	51.91	82.85
TraesCS6A01G067600.1	Wheat	plastid	80.69	80.55
TraesCS6A01G067500.1	Wheat	plastid	73.95	79.61
TraesCS7A01G261500.1	Wheat	cytosol	24.41	78.82
TraesCS6A01G067300.1	Wheat	cytosol	66.85	78.09
EES04391	Sorghum	cytosol	49.0	64.51
Os10t0489500-00	Rice	cytosol	58.83	63.21
KXG29327	Sorghum	plastid	63.02	62.91
Zm00001d053918_P001	Maize	cytosol	32.24	61.89
EES04392	Sorghum	plastid	61.38	60.94
Zm00001d053916_P002	Maize	cytosol	48.63	60.0
EES04390	Sorghum	plastid	61.2	59.57
Os02t0121700-01	Rice	plastid	64.12	59.16
EES04394	Sorghum	endoplasmic reticulum	61.2	56.47
Zm00001d015053_P001	Maize	plastid	57.74	54.56
Zm00001d015054_P001	Maize	plastid	56.1	53.66
Solyc10g005420.1.1	Tomato	cytosol	7.65	51.22
GSMUA_Achr2P03420_001	Banana	cytosol	39.53	45.02
VIT_00s0372g00060.t01	Wine grape	cytosol	15.3	44.92
GSMUA_Achr9P21010_001	Banana	cytosol	38.25	43.84
PGSC0003DMT400029354	Potato	cytosol	22.77	43.71
PGSC0003DMT400029275	Potato	cytosol	21.49	43.54
VIT_00s0572g00010.t01	Wine grape	cytosol	34.24	41.78
VIT_00s0271g00030.t01	Wine grape	cytosol	36.61	41.7
VIT_00s0372g00020.t01	Wine grape	cytosol	30.6	41.38
VIT_00s0266g00020.t01	Wine grape	cytosol	36.61	41.27
VIT_00s0271g00010.t01	Wine grape	cytosol	36.61	40.85
PGSC0003DMT400029266	Potato	cytosol	30.6	40.29
VIT_00s0572g00020.t01	Wine grape	cytosol	36.25	39.25
VIT_00s0372g00040.t01	Wine grape	cytosol	36.25	39.25
VIT_00s0266g00010.t01	Wine grape	cytosol	36.25	39.25
VIT_00s0847g00020.t01	Wine grape	cytosol	29.33	39.17
PGSC0003DMT400029265	Potato	cytosol	35.88	38.4
VIT_00s0266g00070.t01	Wine grape	cytosol	35.52	37.72
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.43	36.57
VIT_00s0385g00020.t01	Wine grape	cytosol	33.7	36.42
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.69	35.51
Solyc05g026590.1.1	Tomato	cytosol	18.4	35.19
Solyc10g005390.2.1	Tomato	cytosol	35.7	34.81
KRH21637	Soybean	cytosol	33.52	34.46
KRH49914	Soybean	plastid	34.79	33.33
KRH49915	Soybean	plastid	33.52	31.29
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.61	31.16
Solyc10g005410.2.1	Tomato	plastid	35.15	30.68
AT1G61680.1	Thale cress	plastid	31.69	30.58
KRH41974	Soybean	cytosol	16.03	30.24
TraesCS2A01G022600.1	Wheat	plastid	25.87	24.61
TraesCS2A01G022400.1	Wheat	plastid	25.32	24.52
TraesCS2A01G022300.1	Wheat	plastid	25.14	23.19
TraesCS7A01G500100.1	Wheat	cytosol	25.14	22.81
TraesCS7A01G499300.2	Wheat	cytosol	20.4	20.33

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6A01G067800	EnsemblPlants:TraesCS6A01G067800.1	:	:	:

Description

No Description!

Coordinates

chr6A:-:36249895..36253374

Molecular Weight (calculated)

63156.7 Da

IEP (calculated)

6.316

GRAVY (calculated)

-0.260

Length

549 amino acids

Sequence
(BLAST)

001: MAAAHVFFFF SVQPLHHSGT PVAGNGGRSG RHRAFFRPST VICPGREPAS HVLSDDFDFE ESITNVQALL HHHRTSRRGL LTTVDHLKRL CIDHYFQDEI
101: DTIMDSCADL IHSDDLLDAT LSLRLMREAG YYVSADDVLR KFSNDNGDFN LGLSKDIRGL LSLQDMSHLN VGESSLYKAN EFSSKHLRFA IKYLEPNLAR
201: YVRQSLDHPY HVSLMQYKAR HHLSYLQNMP TSNMAIENLA LAEFTIKKLQ HQREMQEVKR WWMDLGLAQE IPAARDQVLK WYMWPMTVLE GFSFSRYRIE
301: MTKIISMVYI VDDIFDIVAT QEELSLFTEA IKMWDLAAVD SLPSYMISCY KALYTITSDI ADMVRKEHGL SPINHLKKAW ATLFDGFMIE GKWLSTNQIP
401: TSEDYLRNGI VTSGAPLVCI HLLFMLGHEL PEGKNDDIHR IISCPAKIMR LWDDMGSAKD ESQNGLDGSY KELYQRENPC GDAEKHMLEM IGSEWECLNR
501: ECFSRTKSTL SHSFITASLN FARMVHVMYG YDNEQKLPVL EDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.