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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • plasma membrane 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G090500.1 Wheat plastid 94.04 79.21
TraesCSU01G116900.1 Wheat plastid 91.7 76.83
TraesCS7A01G261500.1 Wheat cytosol 27.66 76.47
TraesCS2A01G478100.1 Wheat cytosol 54.47 74.42
TraesCS6A01G067500.1 Wheat plastid 78.09 71.96
TraesCS6A01G067600.1 Wheat plastid 78.3 66.91
TraesCS6A01G067800.1 Wheat plastid 78.09 66.85
TraesCS6A01G067700.1 Wheat plastid 77.45 66.18
EES04391 Sorghum cytosol 58.09 65.47
Os10t0489500-00 Rice cytosol 66.81 61.45
Zm00001d053916_P002 Maize cytosol 57.02 60.22
Zm00001d053918_P001 Maize cytosol 36.38 59.79
KXG29327 Sorghum plastid 65.32 55.82
EES04390 Sorghum plastid 66.17 55.14
EES04392 Sorghum plastid 62.98 53.53
Os02t0121700-01 Rice plastid 66.6 52.6
EES04394 Sorghum endoplasmic reticulum 65.11 51.43
Zm00001d015053_P001 Maize plastid 61.7 49.91
Zm00001d015054_P001 Maize plastid 58.51 47.91
Solyc10g005420.1.1 Tomato cytosol 8.09 46.34
VIT_00s0372g00060.t01 Wine grape cytosol 18.3 45.99
PGSC0003DMT400029275 Potato cytosol 25.74 44.65
GSMUA_Achr2P03420_001 Banana cytosol 45.74 44.61
PGSC0003DMT400029354 Potato cytosol 26.6 43.71
GSMUA_Achr9P21010_001 Banana cytosol 44.47 43.63
VIT_00s0271g00030.t01 Wine grape cytosol 42.77 41.7
VIT_00s0572g00010.t01 Wine grape cytosol 39.79 41.56
VIT_00s0372g00020.t01 Wine grape cytosol 35.74 41.38
VIT_00s0266g00020.t01 Wine grape cytosol 42.34 40.86
VIT_00s0271g00010.t01 Wine grape cytosol 42.55 40.65
VIT_00s0572g00020.t01 Wine grape cytosol 41.91 38.86
VIT_00s0266g00010.t01 Wine grape cytosol 41.7 38.66
VIT_00s0372g00040.t01 Wine grape cytosol 41.7 38.66
PGSC0003DMT400029266 Potato cytosol 34.04 38.37
VIT_00s0847g00020.t01 Wine grape cytosol 33.4 38.2
VIT_00s0266g00070.t01 Wine grape cytosol 40.64 36.94
PGSC0003DMT400029265 Potato cytosol 40.21 36.84
VIT_00s0271g00060.t01 Wine grape cytosol, plastid 43.19 35.18
VIT_00s0385g00020.t01 Wine grape cytosol 37.02 34.25
Solyc10g005390.2.1 Tomato cytosol 39.79 33.21
KRH21637 Soybean cytosol 37.66 33.15
VIT_00s0385g00010.t01 Wine grape cytosol, plastid 34.26 32.86
KRH49914 Soybean plastid 38.51 31.59
Solyc05g026590.1.1 Tomato cytosol 18.94 31.01
VIT_00s0372g00070.t01 Wine grape cytosol, plasma membrane, plastid 41.7 30.39
KRH41974 Soybean cytosol 18.3 29.55
KRH49915 Soybean plastid 36.81 29.42
Solyc10g005410.2.1 Tomato plastid 38.94 29.09
AT1G61680.1 Thale cress plastid 33.62 27.77
TraesCS2A01G022600.1 Wheat plastid 27.66 22.53
TraesCS2A01G022400.1 Wheat plastid 26.81 22.22
TraesCS7A01G500100.1 Wheat cytosol 28.09 21.82
TraesCS2A01G022300.1 Wheat plastid 27.45 21.68
TraesCS7A01G499300.2 Wheat cytosol 22.34 19.06
Protein Annotations
Gene3D:1.10.600.10Gene3D:1.50.10.130MapMan:9.1.4.2GO:GO:0000287GO:GO:0003674GO:GO:0003824
GO:GO:0005488GO:GO:0008150GO:GO:0008152GO:GO:0010333GO:GO:0016829InterPro:IPR008949
InterPro:IPR036965InterPro:Isoprenoid_synthase_dom_sfPFAM:PF01397PFAM:PF03936PANTHER:PTHR31225PANTHER:PTHR31225:SF0
SUPFAM:SSF48239SUPFAM:SSF48576InterPro:Terpene_cyclase_like_1_CInterPro:Terpene_synth_NInterPro:Terpene_synth_N_sfInterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfaseEnsemblPlantsGene:TraesCS6A01G067300EnsemblPlants:TraesCS6A01G067300.1SEG:seg::
Description
No Description!
Coordinates
chr6A:-:35824296..35827241
Molecular Weight (calculated)
54260.2 Da
IEP (calculated)
5.918
GRAVY (calculated)
-0.272
Length
470 amino acids
Sequence
(BLAST)
001: MMAIVDHLKH LCIDQYFQDE IGNVVDSCMD LTHSDNLLDV ALSMRLMREA GYHVSADEVL QKFANGNGDF SLAHSQDIRG LLSLQDVSHL NMGEASLYKA
101: KEYSGKHLRS TLKYLEPNLA RHVRQSLDHP YHVSLMQYKA RHHLSYLQTL PTRNTAIEKL ALAEFQINKL QHQKELQEIK GWWMDLGLAQ EIPAARNQLV
201: KWYMWPMTIL EGYSFSKYRI EITKIISMVY IVDDIFDLVA TQEELSLFNE AIIMWNLEAA DSLPSYMISC YKALYNITND IADMSKKEHG LNPIDHLKKA
301: WATLFNGFMI EAKWLSGNHA PTRDDYLKNG IITSGAPLLF MHLLFMLGHD LTEENNDHMS RIISCPAKIM RLWDDMGSAK DEAQEGLDGS YKELYLKESP
401: HSDAEGHMLE MIADEWECLN RECFSRTRSS LSPTFIRASL NFARMVSVMY GYDHEHRLPV LEDYTRMLLF
Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.