Factsheet for TraesCSU01G116900.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G090500.1	Wheat	plastid	92.16	92.65
TraesCS6A01G067300.1	Wheat	cytosol	76.83	91.7
TraesCSU01G116600.1	Wheat	plastid	73.8	75.27
TraesCSU01G116700.1	Wheat	plastid	73.62	75.09
EES04391	Sorghum	cytosol	48.84	65.71
Zm00001d053918_P001	Maize	cytosol	31.55	61.89
Os10t0489500-00	Rice	cytosol	55.97	61.45
KXG29327	Sorghum	plastid	59.18	60.36
Zm00001d053916_P002	Maize	cytosol	47.77	60.22
EES04390	Sorghum	plastid	60.07	59.75
EES04392	Sorghum	plastid	57.4	58.23
Os02t0121700-01	Rice	plastid	59.71	56.3
EES04394	Sorghum	endoplasmic reticulum	59.0	55.63
Zm00001d015053_P001	Maize	plastid	56.51	54.56
Zm00001d015054_P001	Maize	plastid	53.65	52.44
Solyc10g005420.1.1	Tomato	cytosol	6.95	47.56
VIT_00s0372g00060.t01	Wine grape	cytosol	15.15	45.45
GSMUA_Achr2P03420_001	Banana	cytosol	37.61	43.78
GSMUA_Achr9P21010_001	Banana	cytosol	37.25	43.63
PGSC0003DMT400029354	Potato	cytosol	21.39	41.96
PGSC0003DMT400029275	Potato	cytosol	20.14	41.7
VIT_00s0372g00020.t01	Wine grape	cytosol	29.95	41.38
VIT_00s0572g00010.t01	Wine grape	cytosol	32.62	40.67
VIT_00s0266g00020.t01	Wine grape	cytosol	35.29	40.66
VIT_00s0271g00030.t01	Wine grape	cytosol	34.58	40.25
VIT_00s0271g00010.t01	Wine grape	cytosol	35.29	40.24
VIT_00s0572g00020.t01	Wine grape	cytosol	34.94	38.66
VIT_00s0266g00010.t01	Wine grape	cytosol	34.76	38.46
PGSC0003DMT400029266	Potato	cytosol	28.52	38.37
VIT_00s0372g00040.t01	Wine grape	cytosol	34.58	38.26
VIT_00s0847g00020.t01	Wine grape	cytosol	27.99	38.2
PGSC0003DMT400029265	Potato	cytosol	34.05	37.23
VIT_00s0385g00020.t01	Wine grape	cytosol	33.16	36.61
VIT_00s0266g00070.t01	Wine grape	cytosol	33.69	36.56
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	37.08	36.05
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.02	35.51
KRH21637	Soybean	cytosol	32.26	33.9
Solyc10g005390.2.1	Tomato	cytosol	33.51	33.39
KRH49914	Soybean	plastid	32.8	32.11
Solyc05g026590.1.1	Tomato	cytosol	16.22	31.71
KRH49915	Soybean	plastid	32.62	31.12
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.47	30.85
Solyc10g005410.2.1	Tomato	plastid	33.69	30.05
KRH41974	Soybean	cytosol	14.97	28.87
AT1G61680.1	Thale cress	plastid	29.23	28.82
TraesCSU01G238200.1	Wheat	plastid	16.04	22.9

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	ncoils:Coil	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCSU01G116900	EnsemblPlants:TraesCSU01G116900.1	SEG:seg	:

Description

No Description!

Coordinates

chrUn:+:100769674..100773271

Molecular Weight (calculated)

64206.1 Da

IEP (calculated)

6.180

GRAVY (calculated)

-0.223

Length

561 amino acids

Sequence
(BLAST)

001: MAAAQITSLS FSAQPIMFHS SLPVAGNGGP RGRPNAFFCP WAPVICHGRR EATPHALSDD CDFQDLLSVQ HQEALTSVQA LFLQHPKSSR GMMTIVDHLK
101: HLCIDQYFQD EIGNVVDSCM DLIRSDNLLD VTLSMRLMRE AGYHVSADGV LQKFANGNDD FSLAHSQDIR GLLSLHDVSQ LNMGEASLYK AKEYSRKHLR
201: STLNYLEPNL ARYVKQSLDH PYHVSLMQFK ARHHLSYLQS LPTRNAAIEK LAVAEFQINK LQHQREMQEV NRWWMDLGLA KEIPAARDQV VKWYMWPMTI
301: LEGYSFSKYR IAITKIISMV YIVDDIFDLV ATQEELSLFN EAIIMWNLEA ADSLPSYMIS CYKALYNITN DIADMSMKEH GLNSINHLKK AWATLFDGFM
401: IEAKWLSGNH VPAREDYLRN GIITSGAPLL FMHLLFMLGH DITEENNDHM SRIISCPAKI MRLWDDMGSA KDEAQEGLDC SYKELYLKES PHGDAEEHML
501: EMIAGEWEGL NRECFSRTRS SLSPTFIRAS LNFARMVSVM YGYDHEHRLP VLEDYTRMLL F

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.