Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G003420.1 | Barley | plastid | 81.17 | 56.26 |
| TraesCS2A01G022300.1 | Wheat | plastid | 75.32 | 49.75 |
| OQU81208 | Sorghum | mitochondrion, plastid | 51.4 | 34.65 |
| Zm00001d004279_P001 | Maize | mitochondrion | 39.44 | 32.16 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 35.62 | 24.73 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 22.39 | 21.0 |
| KRH22759 | Soybean | cytosol | 29.26 | 20.25 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 27.23 | 19.56 |
| KRH55947 | Soybean | cytosol | 15.52 | 18.89 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 14.76 | 18.3 |
| KRH26550 | Soybean | cytosol | 19.34 | 18.1 |
| TraesCSU01G116600.1 | Wheat | plastid | 24.94 | 17.82 |
| TraesCSU01G116700.1 | Wheat | plastid | 24.94 | 17.82 |
| Solyc03g007730.1.1 | Tomato | cytosol | 25.45 | 17.79 |
| TraesCSU01G116900.1 | Wheat | plastid | 22.9 | 16.04 |
| PGSC0003DMT400095524 | Potato | cytosol | 16.29 | 14.55 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| EnsemblPlantsGene:TraesCSU01G238200 | EnsemblPlants:TraesCSU01G238200.1 | : | : | : | : |
Description
No Description!
Coordinates
chrUn:-:353661710..353663381
Molecular Weight (calculated)
44349.5 Da
IEP (calculated)
6.447
GRAVY (calculated)
-0.329
Length
393 amino acids
Sequence
(BLAST)
(BLAST)
001: MAWQLQQTMA TTSTRFRTSS LATVRCSAAA RRSANYAPSS WDYDSLLQLS PNNGGQADKV DKLKAGVRER LVAASRGGHQ TAMLGLVDTV QRLGIAYHFE
101: EEIACILSSI HREPHQCSWD YDASDVASAG LRFRLLRDGG FPVLFPQECL EDLKRGPDDV KGLLSLYEAS YLAFEGEETL DEARAFSKIA LKKLLPSMDH
201: HLRHSVVRSL DLPLHRRSPR LESRWFIDHY ARDEINSDQL LVRFATTDFN NVQSVHQEEL GRLARWWKGT GLSEKLGFAR DRLMECFHCA NGIVWGPKDG
301: ACREVLAKVS NLIVHLDDVY DVYGTLDELA LFTDAIGRWE ESPSAMLPEY MQALYSVMYN TSADVAENVF KQHGCDTRYV LRKAVSSYTQ LTS
101: EEIACILSSI HREPHQCSWD YDASDVASAG LRFRLLRDGG FPVLFPQECL EDLKRGPDDV KGLLSLYEAS YLAFEGEETL DEARAFSKIA LKKLLPSMDH
201: HLRHSVVRSL DLPLHRRSPR LESRWFIDHY ARDEINSDQL LVRFATTDFN NVQSVHQEEL GRLARWWKGT GLSEKLGFAR DRLMECFHCA NGIVWGPKDG
301: ACREVLAKVS NLIVHLDDVY DVYGTLDELA LFTDAIGRWE ESPSAMLPEY MQALYSVMYN TSADVAENVF KQHGCDTRYV LRKAVSSYTQ LTS
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESVRI LIILSM
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESVRI LIILSM
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.