Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G003420.1 | Barley | plastid | 76.13 | 79.89 |
| TraesCS2A01G022400.1 | Wheat | plastid | 76.13 | 79.89 |
| TraesCSU01G238200.1 | Wheat | plastid | 49.75 | 75.32 |
| TraesCS2A01G022600.1 | Wheat | plastid | 63.03 | 64.99 |
| Zm00001d004279_P001 | Maize | mitochondrion | 43.36 | 53.53 |
| OQU81208 | Sorghum | mitochondrion, plastid | 51.93 | 53.0 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 20.67 | 38.8 |
| TraesCS7A01G500100.1 | Wheat | cytosol | 38.49 | 37.85 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 34.45 | 36.22 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 23.7 | 33.65 |
| KRH55947 | Soybean | cytosol | 17.48 | 32.2 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 29.58 | 32.18 |
| KRH22759 | Soybean | cytosol | 29.75 | 31.16 |
| Solyc03g007730.1.1 | Tomato | cytosol | 29.24 | 30.96 |
| PGSC0003DMT400095524 | Potato | cytosol | 22.69 | 30.68 |
| KRH26550 | Soybean | cytosol | 21.51 | 30.48 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 21.68 | 27.45 |
| TraesCS6A01G067500.1 | Wheat | plastid | 23.19 | 27.06 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 14.96 | 25.87 |
| TraesCS6A01G067600.1 | Wheat | plastid | 23.53 | 25.45 |
| TraesCS6A01G067800.1 | Wheat | plastid | 23.19 | 25.14 |
| TraesCS6A01G067700.1 | Wheat | plastid | 23.19 | 25.09 |
| TraesCS7A01G499300.2 | Wheat | cytosol | 23.19 | 25.05 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 6.89 | 24.12 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF9 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | EnsemblPlantsGene:TraesCS2A01G022300 | EnsemblPlants:TraesCS2A01G022300.1 | TIGR:cd00684 | SEG:seg | : |
Description
No Description!
Coordinates
chr2A:-:10734405..10751458
Molecular Weight (calculated)
67589.7 Da
IEP (calculated)
6.375
GRAVY (calculated)
-0.459
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MATSSKCLWP TSPLRKAVRC TSSSSSSTPP ARRSANYAPS SWDYDSLLLS LDDRRHDTHD QLRARLDGLR ARSFDKLKAE VRERLMVVSG GDDQPAKLRL
101: VDTLQRLGIA YHFDDEITDI LTTIHSAKNH HWSRDDDDDD VASAALRFRL LRESGFPVHF PARKSLEDLR RGIDDDVKGL LSLYEASYLT FEGEEALDEA
201: RAFSKKALIK LLPSMDHHLR RSVVRSLDLP LHRRSPRLEA RWFIDHYASD ESNSDPLLVR FATKDFNNVQ SVHQEELARL ARWWKGTALT EKLGFARDRL
301: MECFHYANGI VWEPNNGACR EVLAKVANLI VHLDDVYDVY GTPDELVLFT DAIGRWEESP CEMLPEYMQA LYSVVYNTSA EVAENVFKQH GCDTRYVLQK
401: AWGDMAESFL VEAKWQHGNH RPTLHEYLDN GSISSSAPLL LQHAFPLLRV EEKLTSISIA KVGGYPKLVQ SASLVLRLCN DSATHSIRTI NPTFFAELER
501: GDAPSSIAIH MPENSSSEQE SREAMEDLTM EAWKSINEDA FKHCRFSRSF AKTCVNLARI SHCVYQGCDG FGAPDGQNKR QIKELFLDSI MSEKH
101: VDTLQRLGIA YHFDDEITDI LTTIHSAKNH HWSRDDDDDD VASAALRFRL LRESGFPVHF PARKSLEDLR RGIDDDVKGL LSLYEASYLT FEGEEALDEA
201: RAFSKKALIK LLPSMDHHLR RSVVRSLDLP LHRRSPRLEA RWFIDHYASD ESNSDPLLVR FATKDFNNVQ SVHQEELARL ARWWKGTALT EKLGFARDRL
301: MECFHYANGI VWEPNNGACR EVLAKVANLI VHLDDVYDVY GTPDELVLFT DAIGRWEESP CEMLPEYMQA LYSVVYNTSA EVAENVFKQH GCDTRYVLQK
401: AWGDMAESFL VEAKWQHGNH RPTLHEYLDN GSISSSAPLL LQHAFPLLRV EEKLTSISIA KVGGYPKLVQ SASLVLRLCN DSATHSIRTI NPTFFAELER
501: GDAPSSIAIH MPENSSSEQE SREAMEDLTM EAWKSINEDA FKHCRFSRSF AKTCVNLARI SHCVYQGCDG FGAPDGQNKR QIKELFLDSI MSEKH
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.