Factsheet for TraesCS6A01G067600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067500.1	Wheat	plastid	89.09	96.08
TraesCSU01G116600.1	Wheat	plastid	94.91	94.91
TraesCS7A01G261500.1	Wheat	cytosol	28.91	93.53
HORVU6Hr1G012090.1	Barley	cytosol	61.82	89.71
TraesCS6A01G067700.1	Wheat	plastid	81.09	81.09
TraesCS6A01G067800.1	Wheat	plastid	80.55	80.69
TraesCS2A01G478100.1	Wheat	cytosol	49.82	79.65
TraesCS6A01G067300.1	Wheat	cytosol	66.91	78.3
EES04391	Sorghum	cytosol	49.45	65.23
KXG29327	Sorghum	plastid	63.45	63.45
Os10t0489500-00	Rice	cytosol	58.18	62.62
Zm00001d053918_P001	Maize	cytosol	32.55	62.59
Zm00001d053916_P002	Maize	cytosol	50.36	62.25
EES04392	Sorghum	plastid	61.45	61.12
Os02t0121700-01	Rice	plastid	64.0	59.16
EES04390	Sorghum	plastid	60.0	58.51
EES04394	Sorghum	endoplasmic reticulum	62.18	57.48
Zm00001d015053_P001	Maize	plastid	59.82	56.63
Zm00001d015054_P001	Maize	plastid	57.45	55.05
Solyc10g005420.1.1	Tomato	cytosol	6.73	45.12
VIT_00s0372g00060.t01	Wine grape	cytosol	14.91	43.85
GSMUA_Achr2P03420_001	Banana	cytosol	37.82	43.15
GSMUA_Achr9P21010_001	Banana	cytosol	37.27	42.8
PGSC0003DMT400029275	Potato	cytosol	20.55	41.7
VIT_00s0271g00030.t01	Wine grape	cytosol	36.36	41.49
PGSC0003DMT400029354	Potato	cytosol	21.45	41.26
VIT_00s0572g00010.t01	Wine grape	cytosol	33.27	40.67
VIT_00s0372g00020.t01	Wine grape	cytosol	29.64	40.15
VIT_00s0266g00020.t01	Wine grape	cytosol	35.27	39.84
VIT_00s0271g00010.t01	Wine grape	cytosol	35.27	39.43
VIT_00s0847g00020.t01	Wine grape	cytosol	28.91	38.69
VIT_00s0372g00040.t01	Wine grape	cytosol	35.64	38.66
VIT_00s0572g00020.t01	Wine grape	cytosol	35.64	38.66
VIT_00s0266g00010.t01	Wine grape	cytosol	35.64	38.66
PGSC0003DMT400029266	Potato	cytosol	29.27	38.61
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.18	36.4
PGSC0003DMT400029265	Potato	cytosol	33.82	36.26
VIT_00s0266g00070.t01	Wine grape	cytosol	34.0	36.17
VIT_00s0385g00020.t01	Wine grape	cytosol	32.18	34.84
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.55	34.29
KRH21637	Soybean	cytosol	33.09	34.08
Solyc10g005390.2.1	Tomato	cytosol	34.18	33.39
KRH49914	Soybean	plastid	34.18	32.81
Solyc05g026590.1.1	Tomato	cytosol	16.36	31.36
KRH49915	Soybean	plastid	33.09	30.95
AT1G61680.1	Thale cress	plastid	32.0	30.93
KRH41974	Soybean	cytosol	16.36	30.93
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.82	30.54
Solyc10g005410.2.1	Tomato	plastid	34.18	29.89
TraesCS2A01G022400.1	Wheat	plastid	25.64	24.87
TraesCS2A01G022600.1	Wheat	plastid	25.64	24.44
TraesCS7A01G500100.1	Wheat	cytosol	26.0	23.64
TraesCS2A01G022300.1	Wheat	plastid	25.45	23.53
TraesCS7A01G499300.2	Wheat	cytosol	19.27	19.24

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	SignalP:SignalP-noTM	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6A01G067600	EnsemblPlants:TraesCS6A01G067600.1	SEG:seg	:

Description

No Description!

Coordinates

chr6A:-:36053140..36056439

Molecular Weight (calculated)

63408.0 Da

IEP (calculated)

6.078

GRAVY (calculated)

-0.315

Length

550 amino acids

Sequence
(BLAST)

001: MAAAHVCFSL SSFAPLFHSA LPVARNGGQS GRNRGLIRPS PVIYPGREPV SHELSDDFDF QESLMNVQAL LHQHPKSNKG MLSMVDHLKR LCIDNYFQDE
101: IDNIMDSSVD LLHSNDLLDA TLSLRLMREV GYYVFADDVL QKFTNDNGDF NLRHSKDLRG LLSLHDMSHL NMGEASLYKA KEFSSKHMKF AIKYLEPNLA
201: RYVMKSLDHP YHVSLRQYKA RHHLSYLQNL PTRHTAIEKL AVAEFQMKKL QHQSEMQEVK RWWVDLGLSQ EIPAARDQVL KWYMWSMTIL EGFSFSRYRV
301: EATKVISMVY IVDDIFDLVA TQEELSRFNE AIKMWDLAAA ESLPSYMISC YKALYTITND IADMVRKEHG LNPINHLKQA WATLFDGFMI EGKWLSTNQV
401: PTSEDYLRNG VITSGAPLLF MHLLFMLGHD LTEDNNDHIL RVISCPAKIM RLWDDMGSAK DELQEGLDGS YKDLYQRENP HADAEKHMLD MIAGEWEDLN
501: RECFSQTKST LPPSFIGASL NFARMVSIMY GYDDEQRLPA LEDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.