CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0372g00060.t01	Wine grape	cytosol	19.22	60.43
VIT_00s0372g00020.t01	Wine grape	cytosol	38.78	56.16
VIT_00s0572g00010.t01	Wine grape	cytosol	42.69	55.78
VIT_00s0271g00010.t01	Wine grape	cytosol	46.43	55.49
VIT_00s0266g00020.t01	Wine grape	cytosol	45.75	55.24
VIT_00s0271g00030.t01	Wine grape	cytosol	44.73	54.56
VIT_00s0266g00010.t01	Wine grape	cytosol	46.6	54.04
VIT_00s0572g00020.t01	Wine grape	cytosol	46.43	53.85
VIT_00s0372g00040.t01	Wine grape	cytosol	45.92	53.25
VIT_00s0847g00020.t01	Wine grape	cytosol	36.9	52.8
PGSC0003DMT400029275	Potato	cytosol	24.15	52.4
KRH21637	Soybean	cytosol	46.77	51.5
Solyc10g005420.1.1	Tomato	cytosol	7.14	51.22
VIT_00s0266g00070.t01	Wine grape	cytosol	44.56	50.68
PGSC0003DMT400029354	Potato	cytosol	24.15	49.65
VIT_00s0385g00020.t01	Wine grape	cytosol	42.18	48.82
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	40.14	48.16
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	47.11	48.01
PGSC0003DMT400029266	Potato	cytosol	34.01	47.96
KRH49914	Soybean	plastid	44.56	45.72
Zm00001d053918_P001	Maize	cytosol	21.77	44.76
PGSC0003DMT400029265	Potato	cytosol	38.44	44.05
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	47.11	42.95
KRH41974	Soybean	cytosol	20.92	42.27
GSMUA_Achr9P21010_001	Banana	cytosol	34.01	41.75
GSMUA_Achr2P03420_001	Banana	cytosol	33.84	41.29
AT1G61680.1	Thale cress	plastid	39.29	40.6
Solyc10g005390.2.1	Tomato	cytosol	38.27	39.96
Solyc05g026590.1.1	Tomato	cytosol	19.39	39.72
Zm00001d053916_P002	Maize	cytosol	29.59	39.1
EES04391	Sorghum	cytosol	27.21	38.37
HORVU6Hr1G012090.1	Barley	cytosol	24.49	37.99
TraesCS6A01G067300.1	Wheat	cytosol	29.42	36.81
HORVU6Hr1G088610.2	Barley	cytosol, mitochondrion	31.8	36.74
KXG29327	Sorghum	plastid	33.67	36.0
TraesCS6B01G091000.1	Wheat	cytosol	25.51	35.13
KRH26850	Soybean	nucleus, plastid	33.84	35.04
TraesCS6A01G067500.1	Wheat	plastid	29.93	34.51
EES04392	Sorghum	plastid	32.31	34.36
TraesCS6B01G090800.1	Wheat	plastid	31.8	34.06
Solyc10g005410.2.1	Tomato	plastid	36.22	33.86
EES04390	Sorghum	plastid	32.31	33.69
HORVU6Hr1G012270.1	Barley	plastid	31.12	33.64
TraesCS6D01G065100.1	Wheat	plastid	31.46	33.64
TraesCS6B01G091100.1	Wheat	plastid	31.46	33.64
TraesCS6D01G065200.1	Wheat	plastid	31.12	33.58
TraesCS6D01G048600.1	Wheat	plastid	31.12	33.58
TraesCS7A01G261500.1	Wheat	cytosol	9.69	33.53
TraesCS6A01G067800.1	Wheat	plastid	31.29	33.52
Zm00001d015054_P001	Maize	plastid	32.65	33.45
TraesCSU01G116700.1	Wheat	plastid	31.12	33.27
TraesCS6A01G067700.1	Wheat	plastid	31.12	33.27
TraesCS6B01G091300.1	Wheat	plastid	31.12	33.27
TraesCS6B01G091500.1	Wheat	plastid	31.12	33.21
TraesCS6B01G092800.1	Wheat	plastid	30.95	33.15
TraesCS6B01G092000.1	Wheat	plastid	30.61	33.15
TraesCS2B01G501400.1	Wheat	plastid	30.95	33.09
TraesCS6A01G067600.1	Wheat	plastid	30.95	33.09
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	30.61	33.03
HORVU6Hr1G012170.1	Barley	plastid	30.78	32.97
TraesCS6B01G091700.1	Wheat	plastid	30.61	32.91
Zm00001d015053_P001	Maize	plastid	32.48	32.87
TraesCSU01G116600.1	Wheat	plastid	30.61	32.73
Os10t0489500-00	Rice	cytosol	28.4	32.68
TraesCSU01G116900.1	Wheat	plastid	31.12	32.62
TraesCS6B01G090500.1	Wheat	plastid	30.95	32.62
EES04394	Sorghum	endoplasmic reticulum	32.99	32.6
TraesCS2D01G477300.1	Wheat	plastid	31.29	32.57
TraesCS6B01G091400.1	Wheat	plastid	31.12	32.56
TraesCS2A01G478100.1	Wheat	cytosol	19.05	32.56
KRH22498	Soybean	plastid	31.97	32.47
KRH26852	Soybean	plastid	31.8	32.02
TraesCS7D01G540300.1	Wheat	cytosol, plastid	29.59	31.99
HORVU6Hr1G012110.1	Barley	plastid	32.48	31.68
KRH38260	Soybean	plastid	31.97	31.23
TraesCS6B01G091200.1	Wheat	cytosol	9.01	31.18
KRG90197	Soybean	plastid	31.8	30.86
KRH36347	Soybean	cytosol	11.73	30.8
Os02t0121700-01	Rice	plastid	31.12	30.76
KRH56086	Soybean	plastid	30.1	29.65
KRH25425	Soybean	cytosol	18.88	29.52
KRH25428	Soybean	plastid	29.25	28.57
KRG93110	Soybean	mitochondrion	14.29	28.38
KRH22499	Soybean	cytosol	10.88	28.07
KRH22759	Soybean	cytosol	25.51	26.41
KRH55947	Soybean	cytosol	14.12	25.7
KRH25917	Soybean	plastid	12.24	25.53
KRH22502	Soybean	cytosol	7.48	25.14
KRH26550	Soybean	cytosol	17.69	24.76

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:100783015	MapMan:9.1.4.2	EMBL:ACUP02004647	EnsemblPlantsGene:GLYMA_07G187700
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf
UniProt:K7L2K8	EnsemblPlants:KRH49915	ProteinID:KRH49915	ProteinID:KRH49915.1	PFAM:PF01397	PFAM:PF03936
PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N
InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0002338032	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:35531246..35536157

Molecular Weight (calculated)

67605.2 Da

IEP (calculated)

6.046

GRAVY (calculated)

-0.240

Length

588 amino acids

Sequence
(BLAST)

001: MAFVHPIFAS VNHPIFSPNK CSVFLGVKLI PEHAYSRCHS KKHFTIALNQ NIHISKNGKG RDALQIRHAK ALEEVKRELV SKTRQNADHG LSMVDSIQRL
101: GIEYHFEEEI ETILKKKLLM LRVHNHQGRA YQELSEVALQ FRLLRQEGYY IHADIFDKFW GNEGKLKLTF CDDINGLIGL FEASQLSIEG EDYLHEAEEC
201: CRQYLNTWLS RFHEHPQVKV VADSLRYPIH RSLSRFTPTN SLQIESTEWI RSLQELSKID TEMVSSLHLK EMFAVSKWWK ELGLAKDLKL ARDEPIKWYM
301: WAMACLPDPR FSEERIELTK PLSLVYIIDD IFDFCGNIDE LTLFTEAVKR WDMAATEQLP DYMKGCFKAL YDITNEFAFK IQIKHGWNPI STLIKSWVRL
401: LNAFLEEAKW FASGLVPKAD DYLKNGIVST GAHMILVHSF FFMGDAITQE TITLMDEFPS IISATATILR LCDDLEGDQD VNVKGDDNDG SYIKCYMKEH
501: PATSVEQARE HVAELISDAW KRLNQECLMT DANLFPSSFT KLCLNAARMV PLMYGYDTNS PSKLEEYVKS LLCGGAMQSI PEDQTIVS

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.