CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH36347	Soybean	cytosol	22.07	37.05
KRG93110	Soybean	mitochondrion	28.19	35.81
KRH22499	Soybean	cytosol	20.74	34.21
KRG90197	Soybean	plastid	53.99	33.5
KRH38260	Soybean	plastid	52.39	32.72
KRH56086	Soybean	plastid	44.95	28.31
KRH25428	Soybean	plastid	44.41	27.74
KRH41974	Soybean	cytosol	21.28	27.49
KRH22759	Soybean	cytosol	33.24	22.01
KRH49914	Soybean	plastid	31.91	20.94
KRH26850	Soybean	nucleus, plastid	30.85	20.42
KRH22498	Soybean	plastid	31.12	20.21
KRH26852	Soybean	plastid	31.12	20.03
KRH25917	Soybean	plastid	14.89	19.86
KRH21637	Soybean	cytosol	27.39	19.29
KRH26550	Soybean	cytosol	21.54	19.29
KRH49915	Soybean	plastid	29.52	18.88
KRH55947	Soybean	cytosol	15.16	17.65
KRH22502	Soybean	cytosol	4.79	10.29

Protein Annotations

Gene3D:1.10.600.10	MapMan:9.1.4.2	UniProt:A0A0R0H3H1	EMBL:ACUP02007253	ncoils:Coil	EnsemblPlantsGene:GLYMA_12G101700
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	EnsemblPlants:KRH25425	ProteinID:KRH25425
ProteinID:KRH25425.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF5	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0006EDE101	:

Description

hypothetical protein

Coordinates

chr12:+:8981011..8985722

Molecular Weight (calculated)

43498.8 Da

IEP (calculated)

5.645

GRAVY (calculated)

-0.028

Length

376 amino acids

Sequence
(BLAST)

001: MVGALMRFSE GMVERLEKTA AKLEENVRLM INGMNMETLS LLELIDDKNK IVWGLIYMGL GLSYRFEEDI NKALDKIVSI EIIKDQNKKS MYQTALLFGI
101: LGQHGFDVSQ AEINKYLQGM LSLYETSYLN FEGESLWEAN AFSRTHLMNS LMKEGVDAKM AEQVRHVLEG LPYHQSFHIL EARWWWRDIG LASKLSFARD
201: RLVEAFCWSL AMFPQPQFNN CHNEITKVGI LLVILDDVYD IYGTLDELEL FTNAVERWKV NSVNTLPDRL VLCLMAVYNT VNAMVYEIFK GRGIKILPYL
301: TKVWSNVCKA FLQEAKWFYN KVIPPFNEFL ENARISSTAR VILTPSYFLV CQDQDITEQA LHSLINYHDR SLHSPL

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.