Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 8
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38260 | Soybean | plastid | 76.73 | 77.24 |
| KRH36347 | Soybean | cytosol | 27.72 | 75.0 |
| KRG93110 | Soybean | mitochondrion | 30.03 | 61.49 |
| KRH25425 | Soybean | cytosol | 33.5 | 53.99 |
| KRH56086 | Soybean | plastid | 50.0 | 50.75 |
| KRH25428 | Soybean | plastid | 48.02 | 48.34 |
| KRH22499 | Soybean | cytosol | 16.83 | 44.74 |
| KRH22759 | Soybean | cytosol | 36.14 | 38.56 |
| KRH22502 | Soybean | cytosol | 10.73 | 37.14 |
| KRH26850 | Soybean | nucleus, plastid | 33.99 | 36.27 |
| KRH26550 | Soybean | cytosol | 24.59 | 35.48 |
| KRH22498 | Soybean | plastid | 33.83 | 35.41 |
| KRH26852 | Soybean | plastid | 33.99 | 35.27 |
| KRH55947 | Soybean | cytosol | 18.32 | 34.37 |
| KRH41974 | Soybean | cytosol | 16.5 | 34.36 |
| KRH25917 | Soybean | plastid | 15.84 | 34.04 |
| KRH21637 | Soybean | cytosol | 28.55 | 32.4 |
| KRH49915 | Soybean | plastid | 30.86 | 31.8 |
| KRH49914 | Soybean | plastid | 28.38 | 30.02 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:100786684 | MapMan:9.1.4.2 | EMBL:ACUP02012565 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_20G074400 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 |
| InterPro:Isoprenoid_synthase_dom_sf | UniProt:K7N247 | EnsemblPlants:KRG90197 | ProteinID:KRG90197 | ProteinID:KRG90197.1 | PFAM:PF01397 |
| PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF5 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000295F836 | SEG:seg |
Description
hypothetical protein
Coordinates
chr20:+:26715684..26719462
Molecular Weight (calculated)
70203.6 Da
IEP (calculated)
5.940
GRAVY (calculated)
-0.463
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MATNLILCLS RYNQFLSPTP TLISSTRFPQ SKNFPQKTSL ANLKPQRLIC AVSSQFTQIT DDDSRRSANY QPNLWNFEFL PPSLENDHKV EKLEERAKKV
101: EEEVRKVING IDTKPLLLEL IDDVQHLGLT YKFEKDIIKA LEKIVSLDEN EEHKSELYYT ALSFRLLRQH GFEVSQDVFK RFKDKEGGFS GELKGDVQGL
201: LSLYEASYLG FEGDNLLDEA RAFSTTHLKN NLKQGINTKE AEQVNHALEL PYHRRLQRLE ARWYLEKYEP KEPHHQLLLE LAKLDFNMVQ LLHQKELQEL
301: SRWWSEMGLA SKLEFARDRL MEVYFWALGM APDPQFRECR KAVTKMFGLV TIIDDVYDIY GTLDELQLFT DAVERWDVNV VNTLPDYMKL CYLALYNTVN
401: DTAYSILKEK GRNNLSYLKK SWCELCKAFL QEAKWSNNKI VPAFSKYLEN ASVSSSGVAL LAPSYFSVCQ EQDISFSDKT LHYLTNFGGL VRSSCTIFRL
501: CNDLTTSAAE LERGETTNSI MSYMHENGTS EEHACEELRN LIDIEWKKMN RQRVSDSTLP KAFREIAMNM ARVSHNTYQY GDGLGRPDYN IENRIKFLLI
601: DPVPIN
101: EEEVRKVING IDTKPLLLEL IDDVQHLGLT YKFEKDIIKA LEKIVSLDEN EEHKSELYYT ALSFRLLRQH GFEVSQDVFK RFKDKEGGFS GELKGDVQGL
201: LSLYEASYLG FEGDNLLDEA RAFSTTHLKN NLKQGINTKE AEQVNHALEL PYHRRLQRLE ARWYLEKYEP KEPHHQLLLE LAKLDFNMVQ LLHQKELQEL
301: SRWWSEMGLA SKLEFARDRL MEVYFWALGM APDPQFRECR KAVTKMFGLV TIIDDVYDIY GTLDELQLFT DAVERWDVNV VNTLPDYMKL CYLALYNTVN
401: DTAYSILKEK GRNNLSYLKK SWCELCKAFL QEAKWSNNKI VPAFSKYLEN ASVSSSGVAL LAPSYFSVCQ EQDISFSDKT LHYLTNFGGL VRSSCTIFRL
501: CNDLTTSAAE LERGETTNSI MSYMHENGTS EEHACEELRN LIDIEWKKMN RQRVSDSTLP KAFREIAMNM ARVSHNTYQY GDGLGRPDYN IENRIKFLLI
601: DPVPIN
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.