Factsheet for TraesCS6D01G048600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G065200.1	Wheat	plastid	98.53	98.53
TraesCS6B01G092800.1	Wheat	plastid	91.19	90.53
TraesCS6A01G067800.1	Wheat	plastid	91.01	90.35
HORVU6Hr1G012170.1	Barley	plastid	89.36	88.71
TraesCS6D01G065100.1	Wheat	plastid	86.06	85.27
TraesCS2D01G477300.1	Wheat	plastid	81.1	78.23
EES04391	Sorghum	cytosol	48.99	64.03
TraesCS7D01G540300.1	Wheat	cytosol, plastid	62.94	63.05
KXG29327	Sorghum	plastid	63.12	62.55
Zm00001d053918_P001	Maize	cytosol	32.66	62.24
Os10t0489500-00	Rice	cytosol	57.98	61.84
EES04392	Sorghum	plastid	62.2	61.3
Zm00001d053916_P002	Maize	cytosol	49.17	60.22
EES04390	Sorghum	plastid	60.18	58.16
Os02t0121700-01	Rice	plastid	63.3	57.98
EES04394	Sorghum	endoplasmic reticulum	61.65	56.47
Zm00001d015053_P001	Maize	plastid	57.98	54.39
Zm00001d015054_P001	Maize	plastid	55.78	52.96
Solyc10g005420.1.1	Tomato	cytosol	7.52	50.0
GSMUA_Achr2P03420_001	Banana	cytosol	40.0	45.23
VIT_00s0372g00060.t01	Wine grape	cytosol	15.41	44.92
GSMUA_Achr9P21010_001	Banana	cytosol	38.72	44.05
PGSC0003DMT400029354	Potato	cytosol	22.75	43.36
PGSC0003DMT400029275	Potato	cytosol	21.47	43.17
VIT_00s0271g00030.t01	Wine grape	cytosol	37.8	42.74
VIT_00s0572g00010.t01	Wine grape	cytosol	34.5	41.78
VIT_00s0266g00020.t01	Wine grape	cytosol	37.06	41.48
VIT_00s0372g00020.t01	Wine grape	cytosol	30.83	41.38
VIT_00s0271g00010.t01	Wine grape	cytosol	37.06	41.06
PGSC0003DMT400029266	Potato	cytosol	31.19	40.77
VIT_00s0372g00040.t01	Wine grape	cytosol	36.7	39.45
VIT_00s0266g00010.t01	Wine grape	cytosol	36.7	39.45
VIT_00s0572g00020.t01	Wine grape	cytosol	36.7	39.45
VIT_00s0847g00020.t01	Wine grape	cytosol	29.72	39.42
PGSC0003DMT400029265	Potato	cytosol	35.78	38.01
VIT_00s0266g00070.t01	Wine grape	cytosol	35.78	37.72
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	39.82	37.61
VIT_00s0385g00020.t01	Wine grape	cytosol	34.31	36.81
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	32.48	36.12
Solyc05g026590.1.1	Tomato	cytosol	18.17	34.49
Solyc10g005390.2.1	Tomato	cytosol	35.41	34.28
KRH21637	Soybean	cytosol	33.58	34.27
KRH49914	Soybean	plastid	35.78	34.03
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.88	31.16
KRH49915	Soybean	plastid	33.58	31.12
KRH41974	Soybean	cytosol	16.51	30.93
AT1G61680.1	Thale cress	plastid	31.74	30.4
Solyc10g005410.2.1	Tomato	plastid	34.86	30.21
TraesCS7D01G487700.2	Wheat	cytosol	22.02	27.52
TraesCS2D01G023600.1	Wheat	plastid	25.5	24.34
TraesCS2D01G023800.1	Wheat	plastid	25.87	24.1
TraesCS2D01G023100.1	Wheat	plastid	24.77	23.89

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6D01G048600	EnsemblPlants:TraesCS6D01G048600.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6D:-:23437454..23441112

Molecular Weight (calculated)

62680.9 Da

IEP (calculated)

6.206

GRAVY (calculated)

-0.299

Length

545 amino acids

Sequence
(BLAST)

001: MAAAHVFSVQ PLHHSASPVA RNGGRSGGNR AFFRPSTVIC PGREPASHEL SDDFDFQESV KNVQALLHHH PSRRGLLTTV DHLKRLYIDH YFQDEIETII
101: DSCADLIHSD DLLDATLSLR LMREAGYYVS ADDVLQKFRN DNGEFNLGLS KDIRGLLSLQ DISHLNMGES SLYKANEFSS KHLRFTIKYL EPNLAIYVRR
201: SLDHPYHVSL MQYKARHHLS YLQSMPTRNM AIENLAFAEF TIKKLQHQRE MQEVKRWWID LGLAQEIPAA RDQVLKWYMW PMTVLEGFCF SRYRVEITKI
301: ISMVYIVDDI FDLVATQEEL SLFTEAMKTW DLAAIDSLPS YMISCYKALY TITSDIANMV RKEHGVSPIN HLKKAWATLF DGFMTEGKWL STNQVPTSED
401: YLRNGVVTSG APLVFMHLFF MLGHELPEGN NDDIHRVISC PAKIMRLWDD MGSAKDESQN GLDGSYKELY QRENPHGDVE KHMLEMIGSE WEGLNRECFS
501: GTTSTLSHSF ITASLNFARM VRVMYGYDDE QKLPVLEDYT RMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.