Factsheet for TraesCS7D01G540300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 4
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, nucleus, plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G012270.1	Barley	plastid	76.29	76.29
TraesCS6B01G092000.1	Wheat	plastid	75.37	75.51
TraesCS6D01G065100.1	Wheat	plastid	64.52	63.82
TraesCS6D01G065200.1	Wheat	plastid	63.6	63.49
TraesCS6D01G048600.1	Wheat	plastid	63.05	62.94
EES04391	Sorghum	cytosol	47.24	61.63
TraesCS2D01G477300.1	Wheat	plastid	63.05	60.71
Os10t0489500-00	Rice	cytosol	56.43	60.08
KXG29327	Sorghum	plastid	59.01	58.36
Zm00001d053916_P002	Maize	cytosol	46.14	56.4
EES04390	Sorghum	plastid	58.27	56.21
Os02t0121700-01	Rice	plastid	61.4	56.13
EES04392	Sorghum	plastid	56.99	56.06
Zm00001d053918_P001	Maize	cytosol	29.23	55.59
Zm00001d015053_P001	Maize	plastid	57.54	53.87
EES04394	Sorghum	endoplasmic reticulum	57.54	52.6
Zm00001d015054_P001	Maize	plastid	55.33	52.44
Solyc10g005420.1.1	Tomato	cytosol	6.62	43.9
VIT_00s0372g00060.t01	Wine grape	cytosol	15.07	43.85
GSMUA_Achr2P03420_001	Banana	cytosol	37.13	41.91
VIT_00s0572g00010.t01	Wine grape	cytosol	34.19	41.33
VIT_00s0847g00020.t01	Wine grape	cytosol	30.88	40.88
GSMUA_Achr9P21010_001	Banana	cytosol	35.29	40.08
VIT_00s0271g00030.t01	Wine grape	cytosol	35.48	40.04
PGSC0003DMT400029275	Potato	cytosol	19.85	39.85
VIT_00s0572g00020.t01	Wine grape	cytosol	36.76	39.45
VIT_00s0372g00040.t01	Wine grape	cytosol	36.76	39.45
VIT_00s0266g00010.t01	Wine grape	cytosol	36.76	39.45
PGSC0003DMT400029354	Potato	cytosol	20.59	39.16
VIT_00s0372g00020.t01	Wine grape	cytosol	28.86	38.67
VIT_00s0266g00020.t01	Wine grape	cytosol	34.38	38.4
VIT_00s0271g00010.t01	Wine grape	cytosol	34.56	38.21
PGSC0003DMT400029266	Potato	cytosol	28.86	37.65
PGSC0003DMT400029265	Potato	cytosol	33.27	35.28
VIT_00s0266g00070.t01	Wine grape	cytosol	33.09	34.82
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	36.76	34.66
VIT_00s0385g00020.t01	Wine grape	cytosol	32.17	34.45
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	30.51	33.88
KRH21637	Soybean	cytosol	32.35	32.96
KRH49914	Soybean	plastid	33.64	31.94
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	37.32	31.47
Solyc10g005390.2.1	Tomato	cytosol	32.35	31.26
Solyc05g026590.1.1	Tomato	cytosol	16.18	30.66
KRH41974	Soybean	cytosol	15.99	29.9
KRH49915	Soybean	plastid	31.99	29.59
AT1G61680.1	Thale cress	plastid	30.7	29.35
Solyc10g005410.2.1	Tomato	plastid	31.8	27.5
TraesCS7D01G487700.2	Wheat	cytosol	21.32	26.61
TraesCS2D01G023800.1	Wheat	plastid	26.1	24.27
TraesCS2D01G023600.1	Wheat	plastid	25.18	23.99
TraesCS2D01G023100.1	Wheat	plastid	24.45	23.54

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
EnsemblPlantsGene:TraesCS7D01G540300	EnsemblPlants:TraesCS7D01G540300.1	:	:	:	:

Description

No Description!

Coordinates

chr7D:-:630437707..630453338

Molecular Weight (calculated)

62285.2 Da

IEP (calculated)

5.274

GRAVY (calculated)

-0.335

Length

544 amino acids

Sequence
(BLAST)

001: MAAHVFSSAA EPSLLRLAGE GGSRLRGQFF CPCPVTSPGR ESQALSDDFD FQEGLKSVKT MLHQNHKDKR EVMTNIDHLK RLCIDHYFHD EIDEAMNTCL
101: DLVHSDDLLD ATLSFRLVRE AGYDVSADEV LRKFTDVNGD YTLDHSKDTK GLLSLQDISN LNMGEESLYK AKEFSRKHLT SAIEHLDPNL ARYVRKSLDH
201: PYHVSLMQYK ARHHLSYMQS LSSTDTKMQE LALAEFQLNK LLNQREMQEI KRWWMGLGLA QEIPATRDQI LKWYMFPLTI LEGQAFSRYR IETTKIISLV
301: SIVDDIFDVI ATQEELSRFT EAIKMWDLAA ADSLPSYMRS CYSALYTITN DIADLVERDH GLYPMEQLKK TWAKLFDAFL VESKWLSADQ DPSLDDYLSN
401: GVITTGAPLA LEHLFFMLGH DLSTMGSANL TAGQIRPIIS CPSKILRLWD DMGSAKHEAK EGLDGSYKVL YVKENPSGDA EGHMLSLIQS EWEALNRECF
501: SRRSYYPPIV TQISLNFARM VTQFGYDDEQ RRPIVEDYLR MLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.