Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400029275 | Potato | cytosol | 55.88 | 85.98 |
| PGSC0003DMT400029265 | Potato | cytosol | 93.53 | 76.02 |
| PGSC0003DMT400029354 | Potato | cytosol | 47.72 | 69.58 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 25.42 | 56.68 |
| Solyc10g005410.2.1 | Tomato | plastid | 80.34 | 53.26 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 54.44 | 47.1 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 49.64 | 46.0 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 53.48 | 45.33 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 52.28 | 44.76 |
| Zm00001d053918_P001 | Maize | cytosol | 30.22 | 44.06 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 53.48 | 43.98 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 42.69 | 43.84 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 53.24 | 43.79 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 53.24 | 43.79 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 50.84 | 41.01 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 55.88 | 40.38 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 38.85 | 39.42 |
| GSMUA_Achr2P03420_001 | Banana | cytosol | 44.6 | 38.59 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 45.32 | 37.2 |
| GSMUA_Achr9P21010_001 | Banana | cytosol | 42.45 | 36.95 |
| KRH21637 | Soybean | cytosol | 46.76 | 36.52 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 41.49 | 35.31 |
| KRH49914 | Soybean | plastid | 48.44 | 35.25 |
| EES04391 | Sorghum | cytosol | 35.25 | 35.25 |
| PGSC0003DMT400067594 | Potato | cytosol | 20.38 | 34.98 |
| AT1G61680.1 | Thale cress | plastid | 47.0 | 34.45 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 53.24 | 34.42 |
| TraesCS6A01G067300.1 | Wheat | cytosol | 38.37 | 34.04 |
| KRH49915 | Soybean | plastid | 47.96 | 34.01 |
| Zm00001d053916_P002 | Maize | cytosol | 35.49 | 33.26 |
| HORVU6Hr1G012090.1 | Barley | cytosol | 29.98 | 32.98 |
| HORVU6Hr1G088610.2 | Barley | cytosol, mitochondrion | 39.81 | 32.61 |
| KXG29327 | Sorghum | plastid | 42.45 | 32.18 |
| KRH41974 | Soybean | cytosol | 22.3 | 31.96 |
| TraesCS6D01G065200.1 | Wheat | plastid | 41.01 | 31.38 |
| TraesCS6A01G067500.1 | Wheat | plastid | 38.37 | 31.37 |
| TraesCS6D01G048600.1 | Wheat | plastid | 40.77 | 31.19 |
| TraesCS6D01G065100.1 | Wheat | plastid | 41.01 | 31.09 |
| TraesCS6B01G091500.1 | Wheat | plastid | 41.01 | 31.03 |
| TraesCS6B01G091000.1 | Wheat | cytosol | 31.65 | 30.91 |
| TraesCS6A01G067800.1 | Wheat | plastid | 40.29 | 30.6 |
| TraesCS2A01G478100.1 | Wheat | cytosol | 25.18 | 30.52 |
| EES04390 | Sorghum | plastid | 41.25 | 30.5 |
| TraesCS6B01G091400.1 | Wheat | plastid | 41.01 | 30.43 |
| HORVU6Hr1G012170.1 | Barley | plastid | 40.05 | 30.42 |
| TraesCS6B01G413300.1 | Wheat | cytosol, endoplasmic reticulum | 39.57 | 30.28 |
| Os10t0489500-00 | Rice | cytosol | 36.93 | 30.14 |
| TraesCSU01G116700.1 | Wheat | plastid | 39.57 | 30.0 |
| TraesCS6B01G092800.1 | Wheat | plastid | 39.33 | 29.87 |
| EES04392 | Sorghum | plastid | 39.57 | 29.84 |
| TraesCS6B01G092000.1 | Wheat | plastid | 38.85 | 29.83 |
| TraesCS6A01G067700.1 | Wheat | plastid | 39.33 | 29.82 |
| HORVU6Hr1G012270.1 | Barley | plastid | 38.85 | 29.78 |
| Zm00001d015053_P001 | Maize | plastid | 41.49 | 29.78 |
| TraesCS2B01G501400.1 | Wheat | plastid | 39.09 | 29.64 |
| Zm00001d015054_P001 | Maize | plastid | 40.77 | 29.62 |
| HORVU6Hr1G012110.1 | Barley | plastid | 42.69 | 29.52 |
| TraesCS6B01G091100.1 | Wheat | plastid | 38.85 | 29.45 |
| TraesCSU01G116600.1 | Wheat | plastid | 38.85 | 29.45 |
| TraesCS6B01G091300.1 | Wheat | plastid | 38.61 | 29.27 |
| TraesCS6A01G067600.1 | Wheat | plastid | 38.61 | 29.27 |
| TraesCS6B01G091700.1 | Wheat | plastid | 38.37 | 29.25 |
| TraesCS6B01G090500.1 | Wheat | plastid | 39.09 | 29.21 |
| TraesCS2D01G477300.1 | Wheat | plastid | 39.57 | 29.2 |
| TraesCS6B01G090800.1 | Wheat | plastid | 38.37 | 29.14 |
| TraesCS7D01G540300.1 | Wheat | cytosol, plastid | 37.65 | 28.86 |
| TraesCSU01G116900.1 | Wheat | plastid | 38.37 | 28.52 |
| Os02t0121700-01 | Rice | plastid | 40.29 | 28.24 |
| EES04394 | Sorghum | endoplasmic reticulum | 40.05 | 28.07 |
| PGSC0003DMT400070310 | Potato | cytosol | 19.18 | 25.72 |
| PGSC0003DMT400079785 | Potato | cytosol | 18.94 | 25.4 |
| PGSC0003DMT400050941 | Potato | cytosol | 14.39 | 24.0 |
| PGSC0003DMT400015998 | Potato | plastid | 31.89 | 22.89 |
| PGSC0003DMT400095524 | Potato | cytosol | 23.02 | 21.82 |
| PGSC0003DMT400062798 | Potato | cytosol, mitochondrion | 6.47 | 20.15 |
| PGSC0003DMT400047124 | Potato | cytosol | 14.63 | 19.61 |
| TraesCS7A01G261500.1 | Wheat | cytosol | 7.67 | 18.82 |
| TraesCS6B01G091200.1 | Wheat | cytosol | 7.43 | 18.24 |
| PGSC0003DMT400075074 | Potato | cytosol | 8.63 | 17.31 |
| PGSC0003DMT400089009 | Potato | cytosol | 6.47 | 16.77 |
| PGSC0003DMT400055897 | Potato | cytosol | 3.36 | 11.57 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 |
| GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | UniProt:M1ASH9 | PFAM:PF01397 |
| PFAM:PF03936 | EnsemblPlantsGene:PGSC0003DMG402011252 | PGSC:PGSC0003DMG402011252 | EnsemblPlants:PGSC0003DMT400029266 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF0 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0002964056 | : | : | : | : |
Description
Linalool synthase [Source:PGSC_GENE;Acc:PGSC0003DMG402011252]
Coordinates
chr10:-:476402..479130
Molecular Weight (calculated)
47923.1 Da
IEP (calculated)
5.073
GRAVY (calculated)
-0.343
Length
417 amino acids
Sequence
(BLAST)
(BLAST)
001: MQDGFNSTKF GLLVKDVKYA LRTQINSTND LVLVDALQRM GIEHHFQEEI QSILQKEYEQ SACFYKYQNH HDISLCFRLL RQEGYHVSAD VFKRFKNNDD
101: GTFGLNLSQD DVNGLIGLYE ASQLGVEAEE LKLLRDQPLK WYTWPMAVLQ DPRMSQQRIE LAKCISFVYV IDDIFDVYGT IEELTLFTQA VNRWELNAMT
201: DLPEYMRSTY KALYNTINSI GYNVYKIYGQ NPTQNLRNTW GNLCNAFLKE AKWFASGVVP STNEYLKNGV VSSGVGTILV HMFYILGLGV NSNIHLEDIS
301: SMSSSGAMIL RLWDDLGSAK DENQEGKDGS YIECYMKENK DASIELAREH VIKLIEDEWK KLNKEHLHLM SPSSRSFSKA SLNSARMVPL MYSYDDNQSL
401: PILQEYIKSM LYGDLSM
101: GTFGLNLSQD DVNGLIGLYE ASQLGVEAEE LKLLRDQPLK WYTWPMAVLQ DPRMSQQRIE LAKCISFVYV IDDIFDVYGT IEELTLFTQA VNRWELNAMT
201: DLPEYMRSTY KALYNTINSI GYNVYKIYGQ NPTQNLRNTW GNLCNAFLKE AKWFASGVVP STNEYLKNGV VSSGVGTILV HMFYILGLGV NSNIHLEDIS
301: SMSSSGAMIL RLWDDLGSAK DENQEGKDGS YIECYMKENK DASIELAREH VIKLIEDEWK KLNKEHLHLM SPSSRSFSKA SLNSARMVPL MYSYDDNQSL
401: PILQEYIKSM LYGDLSM
001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM
Arabidopsis Description
TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.