Factsheet for PGSC0003DMT400067594

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07690_001	Banana	cytosol	30.86	43.86
PGSC0003DMT400029275	Potato	cytosol	34.16	30.63
PGSC0003DMT400079785	Potato	cytosol	34.98	27.33
PGSC0003DMT400029354	Potato	cytosol	31.69	26.92
PGSC0003DMT400070310	Potato	cytosol	33.33	26.05
PGSC0003DMT400015998	Potato	plastid	57.2	23.92
PGSC0003DMT400029266	Potato	cytosol	34.98	20.38
PGSC0003DMT400062798	Potato	cytosol, mitochondrion	10.7	19.4
PGSC0003DMT400089009	Potato	cytosol	12.35	18.63
PGSC0003DMT400095524	Potato	cytosol	30.45	16.82
PGSC0003DMT400029265	Potato	cytosol	34.98	16.57
PGSC0003DMT400075074	Potato	cytosol	11.11	12.98
PGSC0003DMT400047124	Potato	cytosol	12.35	9.65
PGSC0003DMT400050941	Potato	cytosol	9.88	9.6
KRH25917	Soybean	plastid	0.0	0.0
PGSC0003DMT400055897	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:PGSC0003DMT400067594	EnsemblPlantsGene:PGSC0003DMG400026279	Gene3D:1.10.600.10	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf	InterPro:Terpene_synthase_metal-bd
PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	PFAM:PF03936	PGSC:PGSC0003DMG400026279	SUPFAM:SSF48576	UniParc:UPI00029592C5
UniProt:M1CHJ1	MapMan:9.1.4.2	:	:	:	:

Description

Monoterpene synthase 2 [Source:PGSC_GENE;Acc:PGSC0003DMG400026279]

Coordinates

chr8:+:1830432..1834046

Molecular Weight (calculated)

28081.7 Da

IEP (calculated)

5.651

GRAVY (calculated)

-0.316

Length

243 amino acids

Sequence
(BLAST)

001: MFEPQYSNSR RMLTKVAALG TIIDDIYDVY GTLDELELFT DAVERMDVKA MDQLPNYMKW ADLCKALLRE AKWYYNGYTP SLEEYMDNAW MSIGIPVIVI
101: NVFFCVTNPI TKEAIESLSK YPHIIRCSAT IIRLADDLAT SMDEMERGDV PKSIQCYMND HKGASEKEAR KHINYLIKET WKLLNISQHD NSLFSKSFIE
201: CAINIARTGQ TIYQHGDGHG IQNYEIKNRI SKLFFEPIKY STP

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.