Factsheet for TraesCS6B01G090500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067300.1	Wheat	cytosol	79.21	94.04
TraesCSU01G116900.1	Wheat	plastid	92.65	92.16
TraesCS6B01G091000.1	Wheat	cytosol	58.78	76.81
TraesCS6B01G091200.1	Wheat	cytosol	23.3	76.47
TraesCS6B01G091300.1	Wheat	plastid	74.55	75.64
TraesCS6B01G091100.1	Wheat	plastid	74.37	75.45
TraesCS6B01G092800.1	Wheat	plastid	73.66	74.86
TraesCS6B01G090800.1	Wheat	plastid	73.48	74.68
TraesCS6B01G091500.1	Wheat	plastid	73.66	74.59
TraesCS2B01G501400.1	Wheat	plastid	72.04	73.09
TraesCS6B01G091400.1	Wheat	plastid	72.94	72.42
TraesCS6B01G091700.1	Wheat	plastid	70.79	72.21
EES04391	Sorghum	cytosol	49.82	66.67
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	63.98	65.5
TraesCS6B01G092000.1	Wheat	plastid	62.72	64.46
Os10t0489500-00	Rice	cytosol	57.71	63.01
Zm00001d053918_P001	Maize	cytosol	32.26	62.94
KXG29327	Sorghum	plastid	60.57	61.45
Zm00001d053916_P002	Maize	cytosol	48.92	61.35
EES04390	Sorghum	plastid	60.39	59.75
EES04392	Sorghum	plastid	58.96	59.49
Os02t0121700-01	Rice	plastid	60.57	56.81
EES04394	Sorghum	endoplasmic reticulum	60.39	56.64
Zm00001d015053_P001	Maize	plastid	57.53	55.25
Zm00001d015054_P001	Maize	plastid	54.48	52.96
Solyc10g005420.1.1	Tomato	cytosol	7.35	50.0
VIT_00s0372g00060.t01	Wine grape	cytosol	15.41	45.99
PGSC0003DMT400029354	Potato	cytosol	22.58	44.06
GSMUA_Achr2P03420_001	Banana	cytosol	37.99	43.98
PGSC0003DMT400029275	Potato	cytosol	21.33	43.91
GSMUA_Achr9P21010_001	Banana	cytosol	37.1	43.22
VIT_00s0372g00020.t01	Wine grape	cytosol	30.29	41.63
VIT_00s0271g00030.t01	Wine grape	cytosol	35.48	41.08
VIT_00s0572g00010.t01	Wine grape	cytosol	32.97	40.89
VIT_00s0266g00020.t01	Wine grape	cytosol	35.66	40.86
VIT_00s0271g00010.t01	Wine grape	cytosol	35.84	40.65
PGSC0003DMT400029266	Potato	cytosol	29.21	39.09
VIT_00s0572g00020.t01	Wine grape	cytosol	35.3	38.86
VIT_00s0266g00010.t01	Wine grape	cytosol	35.13	38.66
VIT_00s0372g00040.t01	Wine grape	cytosol	34.95	38.46
VIT_00s0847g00020.t01	Wine grape	cytosol	27.96	37.96
PGSC0003DMT400029265	Potato	cytosol	34.59	37.62
VIT_00s0266g00070.t01	Wine grape	cytosol	34.41	37.14
VIT_00s0385g00020.t01	Wine grape	cytosol	33.33	36.61
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	37.63	36.4
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.0	35.31
Solyc10g005390.2.1	Tomato	cytosol	34.41	34.1
KRH49914	Soybean	plastid	34.41	33.51
KRH21637	Soybean	cytosol	31.72	33.15
Solyc05g026590.1.1	Tomato	cytosol	16.49	32.06
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	35.84	31.01
KRH49915	Soybean	plastid	32.62	30.95
Solyc10g005410.2.1	Tomato	plastid	34.41	30.52
KRH41974	Soybean	cytosol	15.59	29.9
AT1G61680.1	Thale cress	plastid	29.75	29.17
TraesCS2B01G031400.1	Wheat	cytosol	13.44	27.88
TraesCS2B01G031300.1	Wheat	cytosol	13.44	27.88
TraesCS2B01G030900.1	Wheat	plastid	21.15	25.0
TraesCS2B01G031600.1	Wheat	mitochondrion	22.22	23.85
TraesCS2B01G031100.1	Wheat	plastid	24.19	23.81
TraesCS7B01G407200.1	Wheat	cytosol	24.91	23.8
TraesCS2B01G032300.2	Wheat	plastid	24.01	23.63
TraesCS2B01G031000.1	Wheat	plastid	24.01	23.55
TraesCS2B01G031500.1	Wheat	plastid	21.86	22.89
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	7.53	22.83
TraesCS6B01G008700.1	Wheat	cytosol	21.33	21.83
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	17.92	18.15

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6B01G090500	EnsemblPlants:TraesCS6B01G090500.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6B:-:66696036..66699867

Molecular Weight (calculated)

64047.7 Da

IEP (calculated)

6.329

GRAVY (calculated)

-0.293

Length

558 amino acids

Sequence
(BLAST)

001: MAAAHITSLS FSIHQIMFHS PVARNGGRRG RPNAFFCPWA PVICHGRREA TSRALSDNCD FQDLLSVQHQ EGLTGVQALF LRHPKNSSGT MTTVDHLKHL
101: CIDQYFQDEI SNVVDSCMDL THSDNLLDVT LSMRLMREAG YHVSADEVLQ KFANGNGDFS LAHSQDIRGL LSLHDVSHLN MGEASLYKAK EYSGKHLRST
201: LKYLEPKLAR YVRQSLDHPY HVSLMQYKAR HHLSYLQSLP TRNTAIEKLA LAEFQINKLQ HQREMQEVNR WWMDLGLAEE IPAARDQVVK WYMWPMTILE
301: GYSFSKYRIE ITKIISMVYI VDDIFDLVAT QEELSLFNEA IIMWNLEAAD SLPSYMISCY KALYNITNDI ADMSMKEHGL NSIDHLKKAW ATLFDGFMIE
401: AKWLSGGQVP TREDYLRNGI ITSGAPLLFM HLLFMLGHDL TEENNDHMSR IISCPAKIMR LWDDMGSAKD EAQEGLDGSY KELYLKESPH SNAEGHMLEM
501: IADEWEGLNR ECFSRTRSSL SPTFIRASLN FARMVSVMYG YDHEHRLPVL EDYTRMLL

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.