Factsheet for TraesCS2B01G031100.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G030900.1	Wheat	plastid	78.84	94.7
TraesCS2B01G031300.1	Wheat	cytosol	41.45	87.36
TraesCS2B01G031400.1	Wheat	cytosol	41.27	86.99
HORVU2Hr1G003360.2	Barley	plastid	88.01	86.78
TraesCS2B01G031500.1	Wheat	plastid	80.42	85.55
TraesCS2B01G031000.1	Wheat	plastid	85.19	84.89
TraesCS2B01G032300.2	Wheat	plastid	84.48	84.48
TraesCS2B01G031600.1	Wheat	mitochondrion	74.25	80.96
OQU81208	Sorghum	mitochondrion, plastid	53.44	51.97
Zm00001d004279_P001	Maize	mitochondrion	44.09	51.87
TraesCS7B01G407200.1	Wheat	cytosol	40.56	39.38
VIT_00s0392g00030.t01	Wine grape	cytosol	21.34	38.17
VIT_00s0361g00060.t01	Wine grape	cytosol	35.45	35.51
VIT_00s0392g00060.t01	Wine grape	cytosol	24.16	32.7
KRH22759	Soybean	cytosol	31.39	31.34
KRH55947	Soybean	cytosol	17.81	31.27
TraesCS2B01G064700.1	Wheat	cytosol, extracellular	10.05	30.98
Solyc02g079890.1.1	Tomato	cytosol, plastid	29.45	30.53
KRH26550	Soybean	cytosol	22.22	30.0
Solyc03g007730.1.1	Tomato	cytosol	29.45	29.72
PGSC0003DMT400095524	Potato	cytosol	22.93	29.55
TraesCS6B01G008700.1	Wheat	cytosol	25.4	26.42
TraesCS2B01G501400.1	Wheat	plastid	25.22	26.0
TraesCS6B01G091100.1	Wheat	plastid	25.22	26.0
TraesCS6B01G091000.1	Wheat	cytosol	19.58	26.0
TraesCS6B01G092000.1	Wheat	plastid	24.87	25.97
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	24.87	25.59
TraesCS6B01G091300.1	Wheat	plastid	24.69	25.45
TraesCS6B01G091500.1	Wheat	plastid	24.69	25.41
TraesCS6B01G092800.1	Wheat	plastid	24.52	25.32
TraesCS6B01G090800.1	Wheat	plastid	24.16	24.95
TraesCS6B01G091400.1	Wheat	plastid	24.69	24.91
TraesCS6B01G091200.1	Wheat	cytosol	7.41	24.71
TraesCS6B01G091700.1	Wheat	plastid	23.81	24.68
TraesCS6B01G413300.1	Wheat	cytosol, endoplasmic reticulum	23.28	24.22
TraesCS6B01G090500.1	Wheat	plastid	23.81	24.19

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF9
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS2B01G031100	EnsemblPlants:TraesCS2B01G031100.1	TIGR:cd00684	SEG:seg	:

Description

No Description!

Coordinates

chr2B:-:14404715..14407229

Molecular Weight (calculated)

64199.0 Da

IEP (calculated)

6.868

GRAVY (calculated)

-0.405

Length

567 amino acids

Sequence
(BLAST)

001: MAWQLQQTMG TTSTRFRTSS PAMVHCSAAV RRSANYAPSS WDYDSLLQLS PNNGGQADQV DKLKAGVRER LVAASRGGHQ TAMLGLVDTV QRLGIAYHFE
101: EEIAGILRSV HQKPHRCSWD YGDVASTALR FRLLRDSGFP VFFPPESLKN LKHRAGDVKG LLSLYEASYL AFEGEESLDK ARAFSNKALR EHLSSMDHHL
201: RQCVVHALDL PLHRRSPRLE ARWFIDHYSR DESNSDPLLI GFAKVDFNNV QSVNQEELAR LARWWKGTAL SEKLGFARDR LMECFHCANG IVWGPNDGAC
301: REVLAKLANL IVLLDDVYDV YGTLDELALF TDAIGRWEER PSEMLPEYMQ VLYSVMYNTS AEVAENVFKQ HGCDARYFLQ KAWRDMAESF LVEAKWHHGN
401: QRPTLHEYLD NGSISSSAPL LLQHVFPLLH VEEKLTPMSL AKVGSYPKLV QSASLVLRLC NDSATHSAEL DRGDAPSSIC IHMSENSSNE QESREAMKDL
501: TMEAWKSINE DAFKHCQFSR SFAKTCVNLA RISHCIYQGG DGFGAPDDQK KRQIRELYFD SFMTKKH

Best Arabidopsis Sequence Match ( AT4G16740.1 )
(BLAST)

001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KWDVNRLEEL PNYMKLCFLC LVNEINQIGY FVLRDKGFNV IPYLKESWAD MCTTFLKEAK
401: WYKSGYKPNF EEYMQNGWIS SSVPTILLHL FCLLSDQTLD ILGSYNHSVV RSSATILRLA NDLATSSEEL ARGDTMKSVQ CHMHETGASE AESRAYIQGI
501: IGVAWDDLNM EKKSCRLHQG FLEAAANLGR VAQCVYQYGD GHGCPDKAKT VNHVRSLLVH PLPLN

Arabidopsis Description

TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.