Factsheet for TraesCS6A01G067700.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, vacuole
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	vacuole
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G067800.1	Wheat	plastid	84.18	84.34
TraesCS7A01G261500.1	Wheat	cytosol	25.45	82.35
TraesCS2A01G478100.1	Wheat	cytosol	51.45	82.27
TraesCS6A01G067600.1	Wheat	plastid	81.09	81.09
TraesCS6A01G067500.1	Wheat	plastid	74.0	79.8
TraesCS6A01G067300.1	Wheat	cytosol	66.18	77.45
EES04391	Sorghum	cytosol	48.91	64.51
KXG29327	Sorghum	plastid	63.45	63.45
EES04392	Sorghum	plastid	62.36	62.03
Zm00001d053918_P001	Maize	cytosol	32.0	61.54
Os10t0489500-00	Rice	cytosol	57.09	61.45
Zm00001d053916_P002	Maize	cytosol	48.91	60.45
EES04390	Sorghum	plastid	61.09	59.57
Os02t0121700-01	Rice	plastid	63.09	58.32
EES04394	Sorghum	endoplasmic reticulum	61.45	56.81
Zm00001d015053_P001	Maize	plastid	59.64	56.45
Zm00001d015054_P001	Maize	plastid	57.45	55.05
Solyc10g005420.1.1	Tomato	cytosol	7.09	47.56
VIT_00s0372g00060.t01	Wine grape	cytosol	15.27	44.92
GSMUA_Achr2P03420_001	Banana	cytosol	38.91	44.4
GSMUA_Achr9P21010_001	Banana	cytosol	37.82	43.42
PGSC0003DMT400029354	Potato	cytosol	22.0	42.31
PGSC0003DMT400029275	Potato	cytosol	20.73	42.07
VIT_00s0572g00010.t01	Wine grape	cytosol	33.45	40.89
VIT_00s0271g00030.t01	Wine grape	cytosol	35.82	40.87
VIT_00s0372g00020.t01	Wine grape	cytosol	29.64	40.15
VIT_00s0266g00020.t01	Wine grape	cytosol	35.27	39.84
VIT_00s0271g00010.t01	Wine grape	cytosol	35.45	39.63
VIT_00s0847g00020.t01	Wine grape	cytosol	29.45	39.42
PGSC0003DMT400029266	Potato	cytosol	29.82	39.33
VIT_00s0572g00020.t01	Wine grape	cytosol	36.0	39.05
VIT_00s0266g00010.t01	Wine grape	cytosol	36.0	39.05
VIT_00s0372g00040.t01	Wine grape	cytosol	35.82	38.86
PGSC0003DMT400029265	Potato	cytosol	35.27	37.82
VIT_00s0271g00060.t01	Wine grape	cytosol, plastid	38.18	36.4
VIT_00s0266g00070.t01	Wine grape	cytosol	34.18	36.36
VIT_00s0385g00020.t01	Wine grape	cytosol	33.09	35.83
VIT_00s0385g00010.t01	Wine grape	cytosol, plastid	31.27	35.1
KRH21637	Soybean	cytosol	33.09	34.08
Solyc10g005390.2.1	Tomato	cytosol	34.73	33.93
KRH49914	Soybean	plastid	34.36	32.98
Solyc05g026590.1.1	Tomato	cytosol	17.09	32.75
KRH49915	Soybean	plastid	33.27	31.12
VIT_00s0372g00070.t01	Wine grape	cytosol, plasma membrane, plastid	36.18	30.85
KRH41974	Soybean	cytosol	16.18	30.58
Solyc10g005410.2.1	Tomato	plastid	34.18	29.89
AT1G61680.1	Thale cress	plastid	30.55	29.53
TraesCS2A01G022600.1	Wheat	plastid	25.09	23.92
TraesCS2A01G022400.1	Wheat	plastid	24.55	23.81
TraesCS7A01G500100.1	Wheat	cytosol	26.0	23.64
TraesCS2A01G022300.1	Wheat	plastid	25.09	23.19
TraesCS7A01G499300.2	Wheat	cytosol	19.64	19.6

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	InterPro:IPR008949
InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	EnsemblPlantsGene:TraesCS6A01G067700	EnsemblPlants:TraesCS6A01G067700.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr6A:-:36105866..36110459

Molecular Weight (calculated)

63030.0 Da

IEP (calculated)

5.331

GRAVY (calculated)

-0.286

Length

550 amino acids

Sequence
(BLAST)

001: MAAAHAFFSF SSVEPLLHSA SWVAGNGGRS GRNCSFFRPS PVICPGPEPA SHELSDDFDF QESLRNVQAL LQQPPKSRGG MLTTVDHLKR LCIDHYFQDE
101: IDTIMGSCVD LIHSDDLLDA TLSSRMMREA GYYFSADDVL RKFMNNNGDF NLGLSNDIRG LLSLQDMSHL NMGESSLYKA NEFSSKHLRF AIKYLEPNLA
201: RYVSQSLDHP YHVSLMQYKA RHHLSYLQNL PTRNMAIENL ALAEFQIKKL QHQREGQEVK RWWIDLGLAQ EIPAARDQVL KWYMWAMTAL EGFSFSRYRV
301: ETTKIISMVY IVDDIFDLVA TQEELSLFNE AIKTWDLAAI DSLPSYMISC YKALYTITND ISDMVKKEHG LNPINHLKKA WATLFDGFMI EGKWLSTNQA
401: PTSKDYLRNG IITSGVPLVF LHIFFMLGHD LTEDNRDYIF RIISCPAKIM RLYDDMGSAK DESQEGLDGS YKELYQRENS QGDVEEHTLE IIAGEWEDLN
501: RECFSGTNST LSHAFVGTSL NFARMVHVMY GYDDEHRLPI LEDYTRMLLF

Best Arabidopsis Sequence Match ( AT1G61680.1 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE IIFKNILDKK GGFKDVVKND VKGLTELFEA SELRVEGEET LDGAREFTYS
201: RLNELCSGRE SHQKQEIMKS LAQPRHKTVR GLTSKRFTSM IKIAGQEDPE WLQSLLRVAE IDSIRLKSLT QGEMSQTFKW WTELGLEKDV EKARSQPLKW
301: HTWSMKILQD PTLTEQRLDL TKPISLVYVI DDIFDVYGEL EELTIFTRVV ERWDHKGLKT LPKYMRVCFE ALDMITTEIS MKIYKSHGWN PTYALRQSWA
401: SLCKAFLVEA KWFNSGYLPT TEEYMKNGVV SSGVHLVMLH AYILLGEELT KEKVELIESN PGIVSSAATI LRLWDDLGSA KDENQDGTDG SYVECYLNEY
501: KGSTVDEART HVAQKISRAW KRLNRECLNP CPFSRSFSKA CLNIARTVPL MYSYDDDQRL PDEYLKSLM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.