Factsheet for Zm00001d029523_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU92401	Sorghum	cytosol	92.09	82.48
HORVU7Hr1G122730.1	Barley	cytosol	75.1	75.25
TraesCS5B01G018200.1	Wheat	cytosol, mitochondrion, plastid	74.51	68.42
HORVU5Hr1G005860.1	Barley	cytosol	73.32	66.01
TraesCS7A01G499300.2	Wheat	cytosol	65.02	59.71
Zm00001d047440_P001	Maize	cytosol	14.82	25.25
Zm00001d018611_P001	Maize	cytosol, extracellular, mitochondrion, peroxisome	20.55	24.47
Zm00001d004279_P001	Maize	mitochondrion	22.13	23.24
Zm00001d053916_P002	Maize	cytosol	18.38	20.9
Zm00001d053918_P001	Maize	cytosol	11.46	20.28
Zm00001d015053_P001	Maize	plastid	22.33	19.45
Zm00001d015054_P001	Maize	plastid	21.54	18.99

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	UniProt:A0A1D6K5Q3	GO:GO:0000287	GO:GO:0003674
GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	ProteinID:ONL98903.1	PFAM:PF01397
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF7	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C
InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0008428673	EnsemblPlantsGene:Zm00001d029523
EnsemblPlants:Zm00001d029523_P001	EnsemblPlants:Zm00001d029523_T001	:	:	:	:

Description

Alpha-humulene/(-)-(E)-beta-caryophyllene synthase

Coordinates

chr1:+:74533261..74535868

Molecular Weight (calculated)

59944.0 Da

IEP (calculated)

5.336

GRAVY (calculated)

-0.403

Length

506 amino acids

Sequence
(BLAST)

001: MKERRDVLIK EAKKRLTGKH DDPLAEMNLI DAVQRLGVSY HLQDEIHASL QKLNSMEFSN ESFHEISLQF WLLRQERYCM SCDVFQSFMD DQRKLNANIK
101: SDVRALLALY EAAHLGTPTE QFLTEAQRQT TSLLRSMVGH LEKPLADKVR HALRTPSFRR MKRLEARLYI PLYEEDKEDC DEMILELAKL DFYLLQRIHR
201: EEVKEICEWY HGLDSPRKLF YARHRPTEAY FWALGVYYEP QYAKARKLLA KFIATITPYD DTFDNYGIWE ELQPFADVMQ RWDMKEAEGL NECYSDFARF
301: MFGTMIEIEN ALPKDIGRRN VNFIRDIINE VCKGYVTEIG WRDTKYIPPL EEHLKVTLIT CFYWGINCTA FVVFEENVTE EILKWMSRFP QIVKDSCIIS
401: RLMDDIVAHE FETERDNVAT AVTCYMKQYK TTKEEASDAL WNSVEQAWKS MNHEYLTWTS IPSSLLIRVI NLARMMETMY KEIDGYTDSK LLKEWISMLL
501: DQPIPF

Best Arabidopsis Sequence Match ( AT5G23960.1 )
(BLAST)

001: MGSEVNRPLA DFPANIWEDP LTSFSKSDLG TETFKEKHST LKEAVKEAFM SSKANPIENI KFIDALCRLG VSYHFEKDIV EQLDKSFDCL DFPQMVRQEG
101: CDLYTVGIIF QVFRQFGFKL SADVFEKFKD ENGKFKGHLV TDAYGMLSLY EAAQWGTHGE DIIDEALAFS RSHLEEISSR SSPHLAIRIK NALKHPYHKG
201: ISRIETRQYI SYYEEEESCD PTLLEFAKID FNLLQILHRE ELACVTRWHH EMEFKSKVTY TRHRITEAYL WSLGTYFEPQ YSQARVITTM ALILFTALDD
301: MYDAYGTMEE LELFTDAMDE WLPVVPDEIP IPDSMKFIYN VTVEFYDKLD EELEKEGRSG CGFHLKKSLQ KTANGYMQEA KWLKKDYIAT FDEYKENAIL
401: SSGYYALIAM TFVRMTDVAK LDAFEWLSSH PKIRVASEII SRFTDDISSY EFEHKREHVA TGIDCYMQQF GVSKERAVEV MGNIVSDAWK DLNQELMRPH
501: VFPFPLLMRV LNLSRVIDVF YRYQDAYTNP KLLKEHIVSL LIETIPI

Arabidopsis Description

TPS21Alpha-humulene/(-)-(E)-beta-caryophyllene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q84UU4]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.