Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g005420.1.1 | Tomato | cytosol | 28.57 | 36.59 |
| Solyc01g101220.1.1 | Tomato | cytosol | 40.95 | 25.6 |
| Solyc01g105850.2.1 | Tomato | cytosol | 65.71 | 24.82 |
| Solyc01g105960.2.1 | Tomato | cytosol | 60.0 | 17.8 |
| Solyc01g105890.2.1 | Tomato | plastid | 92.38 | 15.93 |
| Solyc01g105880.2.1 | Tomato | mitochondrion, plastid | 84.76 | 15.08 |
| Solyc05g026590.1.1 | Tomato | cytosol | 40.0 | 14.63 |
| Solyc01g105900.2.1 | Tomato | plastid | 69.52 | 13.64 |
| Solyc01g105920.2.1 | Tomato | plastid | 73.33 | 13.01 |
| Solyc02g079840.1.1 | Tomato | cytosol | 60.0 | 11.71 |
| Solyc01g105870.2.1 | Tomato | plastid | 63.81 | 11.04 |
| Solyc02g079890.1.1 | Tomato | cytosol, plastid | 47.62 | 9.14 |
| Solyc01g101190.2.1 | Tomato | cytosol | 47.62 | 9.06 |
| Solyc03g007730.1.1 | Tomato | cytosol | 42.86 | 8.01 |
| Solyc10g005390.2.1 | Tomato | cytosol | 40.95 | 7.64 |
| Solyc10g005410.2.1 | Tomato | plastid | 41.9 | 7.0 |
| KRH25917 | Soybean | plastid | 12.38 | 4.61 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 0.95 | 0.58 |
| Solyc01g105950.2.1 | Tomato | extracellular | 0.0 | 0.0 |
| Solyc01g105860.2.1 | Tomato | cytosol | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Solyc01g105940.2.1 | EnsemblPlantsGene:Solyc01g105940.2 | Gene3D:1.10.600.10 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | InterPro:IPR008949 |
| InterPro:Isoprenoid_synthase_dom_sf | InterPro:Terpene_synthase_metal-bd | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | PFAM:PF03936 | SUPFAM:SSF48576 |
| UniParc:UPI0002767520 | UniProt:K4B2G3 | MapMan:9.1.4.2 | : | : | : |
Description
No Description!
Coordinates
chr1:+:93964875..93966420
Molecular Weight (calculated)
12330.1 Da
IEP (calculated)
7.685
GRAVY (calculated)
0.112
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MPNANPLLLE LAKLDFNIVQ VTHQQDLKSL SRWWKKTGLA KKLSFSRDIL VENMFWTVGA LFEPQHSYFR RLITKVIVFI SIIDDIYDVY GTLDELELFT
101: LAIQR
101: LAIQR
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KLLLIPCKII SNYFTLYLFA YFFSESIYHA DGM
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KLLLIPCKII SNYFTLYLFA YFFSESIYHA DGM
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.