Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 65.17 | 79.25 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 28.2 | 75.32 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 60.43 | 72.86 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 63.74 | 68.1 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 18.25 | 65.25 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 85.55 | 60.77 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 85.07 | 60.54 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 59.0 | 58.31 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 76.3 | 56.89 |
| PGSC0003DMT400055897 | Potato | cytosol | 15.88 | 55.37 |
| PGSC0003DMT400089009 | Potato | cytosol | 20.85 | 54.66 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 69.67 | 53.36 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 21.09 | 52.05 |
| VIT_12s0134g00040.t01 | Wine grape | mitochondrion | 27.49 | 51.79 |
| CDY66920 | Canola | cytosol | 39.34 | 50.15 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 51.42 | 49.32 |
| VIT_00s0392g00030.t01 | Wine grape | cytosol | 36.73 | 48.9 |
| CDY53648 | Canola | cytosol | 29.38 | 48.44 |
| CDY53129 | Canola | cytosol | 29.38 | 48.44 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 67.54 | 48.31 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 57.58 | 46.64 |
| CDY62515 | Canola | cytosol | 40.52 | 42.64 |
| CDY54750 | Canola | cytosol | 40.28 | 42.39 |
| VIT_12s0134g00140.t01 | Wine grape | cytosol | 28.44 | 41.1 |
| VIT_12s0134g00090.t01 | Wine grape | cytosol | 28.2 | 40.48 |
| VIT_00s0372g00060.t01 | Wine grape | cytosol | 17.77 | 40.11 |
| VIT_12s0134g00020.t01 | Wine grape | plastid | 56.64 | 39.77 |
| VIT_12s0134g00030.t01 | Wine grape | mitochondrion | 53.79 | 39.21 |
| Bra025163.1-P | Field mustard | cytosol | 47.87 | 36.07 |
| CDX83560 | Canola | plastid | 47.39 | 35.4 |
| VIT_00s0372g00020.t01 | Wine grape | cytosol | 33.41 | 34.73 |
| AT3G25820.1 | Thale cress | plastid | 49.05 | 34.5 |
| AT3G25830.1 | Thale cress | plastid | 49.05 | 34.5 |
| CDX83558 | Canola | plastid | 48.1 | 34.47 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 9.72 | 34.45 |
| CDX76827 | Canola | plastid | 45.5 | 34.35 |
| AT4G16730.1 | Thale cress | cytosol | 43.84 | 34.32 |
| CDY13587 | Canola | plastid | 47.87 | 34.3 |
| VIT_00s0361g00060.t01 | Wine grape | cytosol | 45.97 | 34.28 |
| AT4G16740.1 | Thale cress | mitochondrion | 45.73 | 34.16 |
| Bra021082.1-P | Field mustard | cytosol | 44.08 | 34.07 |
| AT3G25810.1 | Thale cress | plastid | 48.1 | 33.95 |
| VIT_00s0572g00010.t01 | Wine grape | cytosol | 35.78 | 33.56 |
| CDX90785 | Canola | plastid | 46.68 | 33.22 |
| VIT_00s0271g00030.t01 | Wine grape | cytosol | 37.2 | 32.57 |
| Solyc01g105960.2.1 | Tomato | cytosol | 26.78 | 31.92 |
| VIT_12s0059g02710.t01 | Wine grape | plastid | 39.1 | 31.79 |
| AT2G24210.1 | Thale cress | plastid | 44.31 | 31.64 |
| KRH22502 | Soybean | cytosol | 13.03 | 31.43 |
| Bra000727.1-P | Field mustard | plastid | 36.73 | 30.45 |
| CDY21487 | Canola | plastid | 42.89 | 30.42 |
| Bra000568.1-P | Field mustard | plastid | 42.65 | 30.25 |
| CDX83208 | Canola | plastid | 42.65 | 30.25 |
| VIT_00s0271g00010.t01 | Wine grape | cytosol | 35.07 | 30.08 |
| CDY13589 | Canola | plastid | 39.1 | 29.62 |
| Bra038504.1-P | Field mustard | plastid | 37.68 | 29.61 |
| VIT_00s0266g00010.t01 | Wine grape | cytosol | 35.55 | 29.59 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 47.63 | 29.43 |
| VIT_00s0372g00040.t01 | Wine grape | cytosol | 35.31 | 29.39 |
| VIT_00s0266g00020.t01 | Wine grape | cytosol | 33.89 | 29.36 |
| VIT_00s0572g00020.t01 | Wine grape | cytosol | 34.83 | 28.99 |
| CDY68676 | Canola | cytosol | 25.59 | 28.72 |
| VIT_00s0847g00020.t01 | Wine grape | cytosol | 27.96 | 28.71 |
| VIT_00s0266g00070.t01 | Wine grape | cytosol | 33.65 | 27.47 |
| VIT_00s0392g00060.t01 | Wine grape | cytosol | 27.25 | 27.45 |
| VIT_00s0271g00060.t01 | Wine grape | cytosol, plastid | 37.44 | 27.38 |
| VIT_00s0385g00020.t01 | Wine grape | cytosol | 31.04 | 25.79 |
| VIT_12s0059g02720.t01 | Wine grape | plastid | 23.7 | 25.77 |
| VIT_00s0385g00010.t01 | Wine grape | cytosol, plastid | 29.38 | 25.31 |
| CDY12909 | Canola | cytosol | 13.74 | 25.0 |
| VIT_00s0372g00070.t01 | Wine grape | cytosol, plasma membrane, plastid | 35.07 | 22.95 |
| Bra027079.1-P | Field mustard | plastid | 17.3 | 21.92 |
| VIT_08s0007g06860.t01 | Wine grape | plastid | 13.51 | 19.86 |
| Bra025164.1-P | Field mustard | cytosol | 47.63 | 18.93 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 10.66 | 17.93 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 17.06 | 17.14 |
| CDY61957 | Canola | plastid | 14.69 | 16.4 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 11.14 | 15.36 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 10.9 | 14.84 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 14.69 | 12.86 |
| CDY12910 | Canola | plastid | 0.24 | 0.67 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | ProteinID:CCB62295 | ProteinID:CCB62295.1 | UniProt:F6I5S7 |
| EMBL:FN596752 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 |
| InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | SUPFAM:SSF48239 |
| SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0002109BE7 | ArrayExpress:VIT_13s0067g03740 | EnsemblPlantsGene:VIT_13s0067g03740 | EnsemblPlants:VIT_13s0067g03740.t01 | RefSeq:XP_003634902 | RefSeq:XP_003634902.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr13_random:+:2093144..2095471
Molecular Weight (calculated)
49571.4 Da
IEP (calculated)
4.678
GRAVY (calculated)
-0.263
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MGTVKPWLNE DIKGILCLYE ASYLSVEGEN ILEEARDVTR NSLEEYLKRT VDQNDLTMII NHAMELPLHW RMPRLEARWF IDAYERSQGM NPILLELAKL
101: DYNMVQATYQ EDLKHASMWW RSAVLPEKLS FVRDRLVENF LWTVGFVFEP QFGYCRRILT RVNSLITTID DVYDVYDVYG TLDELELFTD AVDRWDINAM
201: EQLPRYMKIC FLALYNFTSE MAYDVLKEQG FHIIPYLRKA WADLCKSYLV EAKWYHEGYM PSLQEYMNNA WISMSSPVIL VHAYFSITNP VTKEALGCFE
301: RYHDIIRWSS IIFRFSDDLG TSSGELKRGD APKSIQCYMH ETGASEDDAR KYIGFLIDET WKKMNEDRNL NSPFPQTFIG IALMNVARMA QCMYQYGDGY
401: GVQDRETKDR IMTLFIEPIS LT
101: DYNMVQATYQ EDLKHASMWW RSAVLPEKLS FVRDRLVENF LWTVGFVFEP QFGYCRRILT RVNSLITTID DVYDVYDVYG TLDELELFTD AVDRWDINAM
201: EQLPRYMKIC FLALYNFTSE MAYDVLKEQG FHIIPYLRKA WADLCKSYLV EAKWYHEGYM PSLQEYMNNA WISMSSPVIL VHAYFSITNP VTKEALGCFE
301: RYHDIIRWSS IIFRFSDDLG TSSGELKRGD APKSIQCYMH ETGASEDDAR KYIGFLIDET WKKMNEDRNL NSPFPQTFIG IALMNVARMA QCMYQYGDGY
401: GVQDRETKDR IMTLFIEPIS LT
001: MATLCIGSAP IYQNACIHNF RLQRPRRFIS KSMTKTMPDA NPLDLRRRSG NYQPSSWDHS YLLSIENKYV NEKEVITRHV LKKKVKKMLE EVETKSRLEK
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD
101: LELIDDLQKL GVSYHFEQEI NNILTNFHLE NGKNIWKCDK EEDLHATALE FRLLRQHGFG VSEDIFDVII DKIESNTFKS DNITSIITLY EASYLSTKSD
201: TKLHKVIRPF ATEQIRNFVD DESETYNIML REMAIHALEI PYHWRMRRLE TRWYIDAYEK KHDMNLFLAE FAKIDFNIVQ TAHQEDVKYV SCWWKETGLG
301: SQLHFVRDRI VENYFWTVGM IYEPQFGYIR RIVAIVAALI TVIDDIYDIY GTPEELELFT AMVQNWDINR LDELPEYMKL CFLTLFNEIN AMGCDVLKCK
401: NIDVIPYFKK SWADLCKAYL VEAKWYKGGY KPSVEEYMQN AWISISAPTM LIHFYCAFSG QISVQILESL VQQQQDVVRC SATVLRLAND LATSPDELAR
501: GDVLKSVQCY MHETGVSEEE ARTHVQQMIS HTWDEMNYEA RTAARSSSLL SRRFVETAMN LARMSQCMYQ HGDGHGCPDK AKIVDRVQTL LVDPIPLD
Arabidopsis Description
TPS24Beta-myrcene/(E)-beta-ocimene synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LRZ6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.