CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027079.1-P	Field mustard	plastid	87.93	61.26
CDY61957	Canola	plastid	45.69	28.04
VIT_13s0067g00300.t01	Wine grape	cytosol	15.09	22.15
PGSC0003DMT400089009	Potato	cytosol	14.66	21.12
VIT_13s0067g03770.t01	Wine grape	cytosol	27.16	18.16
CDY53648	Canola	cytosol	19.83	17.97
CDY53129	Canola	cytosol	19.83	17.97
CDY54750	Canola	cytosol	30.6	17.71
VIT_13s0067g00090.t01	Wine grape	cytosol	26.29	17.43
CDY66920	Canola	cytosol	24.57	17.22
CDY62515	Canola	cytosol	29.74	17.21
VIT_00s0724g00010.t01	Wine grape	cytosol	28.02	15.22
GSMUA_Achr4P07690_001	Banana	cytosol	11.21	15.2
VIT_00s2271g00010.t01	Wine grape	cytosol	25.43	14.94
KRH22502	Soybean	cytosol	10.78	14.29
PGSC0003DMT400055897	Potato	cytosol	7.33	14.05
CDY71184	Canola	cytosol	19.83	13.77
VIT_13s0067g03740.t01	Wine grape	cytosol	25.0	13.74
VIT_13s0067g00320.t01	Wine grape	cytosol	6.9	13.56
VIT_13s0067g00130.t01	Wine grape	plastid	28.02	12.48
CDY27296	Canola	cytosol	10.34	12.31
Solyc02g079840.1.1	Tomato	cytosol	28.45	12.27
VIT_13s0084g00010.t01	Wine grape	cytosol	28.45	11.98
CDX76827	Canola	plastid	28.45	11.81
VIT_13s0067g03700.t01	Wine grape	cytosol	28.45	11.66
CDX83560	Canola	plastid	27.59	11.33
CDY06577	Canola	cytosol	15.95	11.28
CDX95274	Canola	cytosol	6.47	11.28
CDY13587	Canola	plastid	28.02	11.04
CDX83558	Canola	plastid	28.02	11.04
VIT_13s0067g00370.t01	Wine grape	plastid	28.02	11.02
VIT_13s0067g03790.t01	Wine grape	plastid	28.02	10.96
CDX83208	Canola	plastid	28.02	10.92
CDY68676	Canola	cytosol	17.67	10.9
VIT_13s0019g00060.t01	Wine grape	plastid	27.59	10.77
CDX90785	Canola	plastid	26.72	10.46
CDY21487	Canola	plastid	26.72	10.42
CDY69236	Canola	cytosol	21.55	10.33
CDY68962	Canola	cytosol	22.41	10.32
CDY23121	Canola	cytosol	16.81	10.26
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	16.38	9.97
CDY15827	Canola	cytosol	6.47	9.68
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	28.45	9.66
VIT_13s0067g03830.t01	Wine grape	plastid	18.1	9.55
CDY13053	Canola	extracellular	22.41	9.4
CDY63249	Canola	cytosol	22.41	9.35
CDY70719	Canola	cytosol	13.79	9.2
CDY13589	Canola	plastid	21.98	9.16
CDX98661	Canola	cytosol	21.98	9.16
CDX82478	Canola	cytosol	20.69	8.94
CDY39124	Canola	cytoskeleton, cytosol, plastid	21.12	8.77
CDY02143	Canola	plastid	20.69	8.68
CDX87217	Canola	plastid	21.12	8.15
CDY41707	Canola	plastid	20.26	8.08
CDY32356	Canola	plastid	21.55	8.06
CDY14933	Canola	cytosol	16.81	7.99
CDX74453	Canola	cytosol	18.1	7.91
CDY09324	Canola	plastid	20.26	7.85
CDY18347	Canola	cytosol	5.6	7.83
CDX76457	Canola	plastid	19.83	7.65
CDY42473	Canola	cytosol	18.53	7.65
CDX98659	Canola	plastid	20.26	7.61
CDY54565	Canola	plastid	18.53	7.48
CDY39119	Canola	plastid	19.4	7.48
CDX76471	Canola	plastid	19.4	7.46
CDX95273	Canola	plastid	13.36	7.4
CDX98470	Canola	plastid	18.53	7.36
CDX82475	Canola	plastid	18.1	7.23
CDY67821	Canola	cytosol	6.03	7.22
CDY49723	Canola	plastid	18.53	7.21
CDX75776	Canola	plastid	18.1	7.16
CDX75775	Canola	plastid	12.93	6.2
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	6.03	5.58
CDX82477	Canola	plastid	6.9	5.33
CDY09325	Canola	plastid	6.03	5.19
CDY68788	Canola	endoplasmic reticulum, golgi	9.05	5.0
CDY01639	Canola	cytosol	1.72	2.07
CDY12910	Canola	plastid	0.86	1.34
CDY14934	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.600.10	MapMan:9.1.4.2	GO:A0A078FIU3	UniProt:A0A078FIU3	EnsemblPlants:CDY12909	ProteinID:CDY12909
ProteinID:CDY12909.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00070580001	InterPro:IPR008949	InterPro:Isoprenoid_synthase_dom_sf
PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF0	SUPFAM:SSF48576	InterPro:Terpene_synthase_metal-bd	UniParc:UPI0004EDB202

Description

BnaA09g13650DBnaA09g13650D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FIU3]

Coordinates

chrLK032028:-:345048..346333

Molecular Weight (calculated)

26139.5 Da

IEP (calculated)

4.476

GRAVY (calculated)

-0.106

Length

232 amino acids

Sequence
(BLAST)

001: MNSLAQPRHK TLRRLTSNKF ISIIKIGGEE DNEWLQSLLR VAECDSIMLK SLIREEIPQA FKAEEGKKLA TEMAYMVPGI LQEPCFSEQR LDLTKPISLV
101: YIIDDIFDVY GELDELTIFT QVVESGLICS ERSWSKQNGL IRVTYQILRS NGFVSSGVHL VMLHLLGEEI TTGKVELIES IPKIVSSAAT ILRLWDDLGS
201: AKDENQDGID ESYIECYLNE HKGSTVETLE LG

Best Arabidopsis Sequence Match ( AT1G61680.2 )
(BLAST)

001: MALIATKISS RSCFVSAYPN NSPTFLISKF PNTVDSLSPA NTAKRSILRN VHASVSNPSK QFHNKTSLEY LHELNIKKIK NILSANVDVP SENLEMIDVI
101: QSLGIDLHFR QEIEQTLHMI YKEGLQFNGD LHEIALRFRL LRQEGHYVQE NKKGGFKDVV KNDVKGLTEL FEASELRVEG EETLDGAREF TYSRLNELCS
201: GRESHQKQEI MKSLAQPRHK TVRGLTSKRF TSMIKIAGQE DPEWLQSLLR VAEIDSIRLK SLTQGEMSQT FKWWTELGLE KDVEKARSQP LKWHTWSMKI
301: LQDPTLTEQR LDLTKPISLV YVIDDIFDVY GELEELTIFT RVVERWDHKG LKTLPKYMRV CFEALDMITT EISMKIYKSH GWNPTYALRQ SWASLCKAFL
401: VEAKWFNSGY LPTTEEYMKN GVVSSGVHLV MLHAYILLGE ELTKEKVELI ESNPGIVSSA ATILRLWDDL GSAKDENQDG TDGSYVECYL NEYKGSTVDE
501: ARTHVAQKIS RAWKRLNREC LNPCPFSRSF SKACLNIART VPLMYSYDDD QRLPDEYLKS LM

Arabidopsis Description

TPS14S-(+)-linalool synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q84UV0]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.