Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY67821 | Canola | cytosol | 44.1 | 44.33 |
| PGSC0003DMT400075074 | Potato | cytosol | 33.85 | 31.73 |
| Solyc01g101220.1.1 | Tomato | cytosol | 24.1 | 27.98 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 16.92 | 27.73 |
| PGSC0003DMT400050941 | Potato | cytosol | 34.87 | 27.2 |
| CDY18347 | Canola | cytosol | 23.08 | 27.11 |
| CDY06577 | Canola | cytosol | 37.44 | 22.26 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 67.69 | 21.71 |
| CDY70719 | Canola | cytosol | 37.95 | 21.26 |
| AT3G14540.1 | Thale cress | plastid | 64.62 | 20.93 |
| AT3G14520.1 | Thale cress | plastid | 63.59 | 20.5 |
| PGSC0003DMT400047124 | Potato | cytosol | 32.31 | 20.26 |
| CDX82477 | Canola | plastid | 29.74 | 19.33 |
| CDX82475 | Canola | plastid | 54.87 | 18.42 |
| CDX75776 | Canola | plastid | 54.87 | 18.23 |
| CDX82478 | Canola | cytosol | 49.23 | 17.88 |
| Os02t0458100-01 | Rice | plastid | 35.38 | 17.65 |
| CDX95273 | Canola | plastid | 35.9 | 16.71 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 47.18 | 16.46 |
| CDX75775 | Canola | plastid | 40.51 | 16.32 |
| CDX87217 | Canola | plastid | 50.26 | 16.31 |
| CDY39119 | Canola | plastid | 50.26 | 16.28 |
| CDY14933 | Canola | cytosol | 39.49 | 15.78 |
| CDX98470 | Canola | plastid | 47.18 | 15.75 |
| CDX74453 | Canola | cytosol | 42.05 | 15.44 |
| CDY68962 | Canola | cytosol | 38.46 | 14.88 |
| CDY63249 | Canola | cytosol | 41.03 | 14.39 |
| CDX98661 | Canola | cytosol | 40.51 | 14.18 |
| CDY32356 | Canola | plastid | 44.62 | 14.03 |
| CDY09325 | Canola | plastid | 18.97 | 13.7 |
| CDY69236 | Canola | cytosol | 33.85 | 13.64 |
| CDY02143 | Canola | plastid | 36.41 | 12.84 |
| Solyc01g101190.2.1 | Tomato | cytosol | 35.9 | 12.68 |
| CDY49723 | Canola | plastid | 37.95 | 12.42 |
| CDY09324 | Canola | plastid | 37.95 | 12.35 |
| CDY71184 | Canola | cytosol | 21.03 | 12.28 |
| CDX76471 | Canola | plastid | 37.95 | 12.27 |
| CDY15827 | Canola | cytosol | 9.74 | 12.26 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 23.59 | 12.07 |
| CDY41707 | Canola | plastid | 35.9 | 12.03 |
| CDX98659 | Canola | plastid | 37.95 | 11.97 |
| CDY68676 | Canola | cytosol | 23.08 | 11.97 |
| CDY01639 | Canola | cytosol | 11.79 | 11.92 |
| PGSC0003DMT400070310 | Potato | cytosol | 18.97 | 11.9 |
| PGSC0003DMT400079785 | Potato | cytosol | 18.97 | 11.9 |
| CDY13053 | Canola | extracellular | 33.33 | 11.75 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 18.46 | 11.61 |
| CDY54565 | Canola | plastid | 33.85 | 11.48 |
| CDY61957 | Canola | plastid | 22.05 | 11.38 |
| CDY23121 | Canola | cytosol | 22.05 | 11.32 |
| CDX76457 | Canola | plastid | 33.85 | 10.98 |
| CDY62515 | Canola | cytosol | 22.56 | 10.97 |
| CDY42473 | Canola | cytosol | 31.28 | 10.85 |
| CDY54750 | Canola | cytosol | 21.54 | 10.47 |
| CDY12909 | Canola | cytosol | 12.31 | 10.34 |
| KRG93110 | Soybean | mitochondrion | 15.38 | 10.14 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 12.82 | 9.96 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 15.38 | 9.8 |
| CDY66920 | Canola | cytosol | 15.9 | 9.37 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 20.0 | 9.29 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 21.54 | 8.71 |
| CDX90785 | Canola | plastid | 25.64 | 8.43 |
| CDY21487 | Canola | plastid | 25.64 | 8.4 |
| CDX83208 | Canola | plastid | 25.64 | 8.4 |
| CDX83560 | Canola | plastid | 24.1 | 8.32 |
| CDY13587 | Canola | plastid | 24.1 | 7.98 |
| CDX76827 | Canola | plastid | 22.05 | 7.69 |
| CDX83558 | Canola | plastid | 23.08 | 7.64 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 23.59 | 6.73 |
| CDY12910 | Canola | plastid | 3.59 | 4.7 |
| CDY13589 | Canola | plastid | 13.33 | 4.67 |
| CDY53648 | Canola | cytosol | 4.62 | 3.52 |
| CDY53129 | Canola | cytosol | 4.62 | 3.52 |
| CDX95274 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 0.0 | 0.0 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 0.0 | 0.0 |
| CDY14934 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:A0A078GPP3 | UniProt:A0A078GPP3 | EnsemblPlants:CDY27296 |
| ProteinID:CDY27296 | ProteinID:CDY27296.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00037209001 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF25 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase |
| UniParc:UPI0004EDCD18 | SEG:seg | : | : | : | : |
Description
BnaC04g18760DBnaC04g18760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GPP3]
Coordinates
chrLK032202:+:421962..422718
Molecular Weight (calculated)
22678.1 Da
IEP (calculated)
5.278
GRAVY (calculated)
-0.108
Length
195 amino acids
Sequence
(BLAST)
(BLAST)
001: MSCDAFDRFR GEDSRFKETL ARDVRGMLQL FQVAHLGTPS EDIMDEALSF TRNHLESLDG HNASSAIAPH LFKHIQNALY IPRYGNIEVL VAREYISYYE
101: QDESHNEIIL KFAKLNFNFC QFLCIQEIET LTRWWKDLDL ASKLPHIRDR VVECHFMSLG AYFEQQYSLG RIIVAKITMI VVVVDDTYDA YATLI
101: QDESHNEIIL KFAKLNFNFC QFLCIQEIET LTRWWKDLDL ASKLPHIRDR VVECHFMSLG AYFEQQYSLG RIIVAKITMI VVVVDDTYDA YATLI
001: MEAIRIGFGL PNVHSVPLCL TTTRCLFPRQ RLLHSHTPSW KPAKQQDFFV ASSSKKSSDD LESSLPTPHF SPSLWGDHFL SVSLNRAEFD ELEREIETTK
101: PLARDKLMSS ESSDKEKIRL IHLLVSMGIS YHFDKEIQDI LKHSFTKLDD IIVGEDDLET ISIMFEVFKL YGHKMSCDAF DRFRGNDGRF KESLVRDFRG
201: MLQLFEVAHL GTPCEVIMDE ALSFTRNHLE SLTSGNASTA SPHLLKHIQN SLYIPRYCNI EVLVAREYIS YYEQEEGHDE ILLKFAKLNF NFCQFHYVQE
301: LKTLTKWWRD LDLASKLPYI RDRLVESHLV ALGPYFEPHY SLGRIIVAKI NMIMVVVDDT YDAYATLPQV KALTECLQRW SIEVSDKLPD YLRIVLGSLF
401: DVMGEIEREM RPLGRLYRVK QVVEKIKIIT KAYQEIAKWA RTGHVSTFDE YMKVGVLTAG MADYAAYCFI GMEDINEKEA FEWLNSNPLI IKHLTAMFRL
501: ANDVGTYETE INRGEVANGL NCYMKQYGVT KEEASRELRK MYVYRKKVVV EEFMNSHDHV PRQVLLRCLN IARIFDVFYT EGDGYSEPKG KIEHFMTSLY
601: LHPIPLS
101: PLARDKLMSS ESSDKEKIRL IHLLVSMGIS YHFDKEIQDI LKHSFTKLDD IIVGEDDLET ISIMFEVFKL YGHKMSCDAF DRFRGNDGRF KESLVRDFRG
201: MLQLFEVAHL GTPCEVIMDE ALSFTRNHLE SLTSGNASTA SPHLLKHIQN SLYIPRYCNI EVLVAREYIS YYEQEEGHDE ILLKFAKLNF NFCQFHYVQE
301: LKTLTKWWRD LDLASKLPYI RDRLVESHLV ALGPYFEPHY SLGRIIVAKI NMIMVVVDDT YDAYATLPQV KALTECLQRW SIEVSDKLPD YLRIVLGSLF
401: DVMGEIEREM RPLGRLYRVK QVVEKIKIIT KAYQEIAKWA RTGHVSTFDE YMKVGVLTAG MADYAAYCFI GMEDINEKEA FEWLNSNPLI IKHLTAMFRL
501: ANDVGTYETE INRGEVANGL NCYMKQYGVT KEEASRELRK MYVYRKKVVV EEFMNSHDHV PRQVLLRCLN IARIFDVFYT EGDGYSEPKG KIEHFMTSLY
601: LHPIPLS
Arabidopsis Description
Terpenoid cyclases/Protein prenyltransferases superfamily protein [Source:TAIR;Acc:AT1G31950]
SUBAcon: [endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol]
SUBAcon: [endoplasmic reticulum,vacuole,mitochondrion,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.