CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX76457	Canola	plastid	78.09	74.71
CDY01639	Canola	cytosol	22.96	68.39
CDY18347	Canola	cytosol	18.09	62.65
CDY09325	Canola	plastid	29.22	62.22
CDX98659	Canola	plastid	65.57	61.0
AT4G20230.2	Thale cress	plastid	63.13	58.64
AT3G29190.1	Thale cress	plastid	60.87	58.24
CDX76471	Canola	plastid	60.35	57.55
CDX95273	Canola	plastid	41.04	56.32
CDY09324	Canola	plastid	58.09	55.76
CDY70719	Canola	cytosol	33.57	55.46
CDY68962	Canola	cytosol	47.65	54.37
CDY69236	Canola	cytosol	45.22	53.72
CDX98661	Canola	cytosol	48.7	50.27
CDY41707	Canola	plastid	50.61	50.0
CDY49723	Canola	plastid	51.3	49.5
CDY13053	Canola	extracellular	45.57	47.38
CDY42473	Canola	cytosol	44.35	45.37
CDY23121	Canola	cytosol	29.22	44.21
CDY14933	Canola	cytosol	37.39	44.06
CDX74453	Canola	cytosol	39.3	42.56
CDY63249	Canola	cytosol	40.87	42.27
CDX95274	Canola	cytosol	9.74	42.11
PGSC0003DMT400050941	Potato	cytosol	16.87	38.8
VIT_18s0001g04200.t01	Wine grape	cytosol	8.0	38.66
CDY71184	Canola	cytosol	22.09	38.02
CDY67821	Canola	cytosol	12.7	37.63
CDX82477	Canola	plastid	19.13	36.67
PGSC0003DMT400075074	Potato	cytosol	12.87	35.58
CDX82478	Canola	cytosol	32.52	34.82
CDY39124	Canola	cytoskeleton, cytosol, plastid	33.39	34.35
CDY06577	Canola	cytosol	19.48	34.15
CDY27296	Canola	cytosol	11.48	33.85
CDY39119	Canola	plastid	34.61	33.06
CDX75776	Canola	plastid	33.22	32.54
CDX87217	Canola	plastid	33.91	32.45
CDX82475	Canola	plastid	32.17	31.84
CDY02143	Canola	plastid	30.61	31.83
CDX98470	Canola	plastid	31.83	31.34
CDY32356	Canola	plastid	33.74	31.29
Solyc01g101220.1.1	Tomato	cytosol	8.87	30.36
CDY15827	Canola	cytosol	7.83	29.03
Solyc01g101190.2.1	Tomato	cytosol	27.65	28.8
PGSC0003DMT400047124	Potato	cytosol	15.13	27.97
Os02t0458100-01	Rice	plastid	18.96	27.88
CDX75775	Canola	plastid	23.13	27.48
VIT_18s0001g04510.t01	Wine grape	plastid	14.61	27.45
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.43	26.77
PGSC0003DMT400079785	Potato	cytosol	14.43	26.69
PGSC0003DMT400070310	Potato	cytosol	14.26	26.37
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	16.52	24.93
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.43	23.9
CDY66920	Canola	cytosol	13.39	23.26
CDY68676	Canola	cytosol	15.13	23.14
KRG93110	Soybean	mitochondrion	11.65	22.64
CDX90785	Canola	plastid	23.13	22.43
CDX76827	Canola	plastid	21.74	22.36
CDY54750	Canola	cytosol	15.48	22.19
CDY62515	Canola	cytosol	15.48	22.19
CDX83558	Canola	plastid	22.43	21.9
CDY13587	Canola	plastid	22.43	21.9
CDY21487	Canola	plastid	22.43	21.68
CDX83208	Canola	plastid	22.43	21.68
CDX83560	Canola	plastid	21.04	21.42
CDY68788	Canola	endoplasmic reticulum, golgi	15.48	21.19
CDY13589	Canola	plastid	19.48	20.11
CDY61957	Canola	plastid	13.22	20.11
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	23.65	19.91
CDY12910	Canola	plastid	5.04	19.46
VIT_18s0001g05430.t01	Wine grape	cytosol	16.17	19.29
CDY12909	Canola	cytosol	7.48	18.53
GSMUA_Achr6P24330_001	Banana	cytosol	4.17	17.02
GSMUA_Achr6P24340_001	Banana	cytosol	4.35	16.78
CDY53129	Canola	cytosol	7.3	16.41
CDY53648	Canola	cytosol	7.3	16.41
CDY14934	Canola	cytosol	0.35	12.5

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078IZJ5	UniProt:A0A078IZJ5	EnsemblPlants:CDY54565
ProteinID:CDY54565	ProteinID:CDY54565.1	ncoils:Coil	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00014306001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31045
PANTHER:PTHR31045:SF4	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EE329E	SEG:seg	:	:	:

Description

BnaA08g30440DBnaA08g30440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZJ5]

Coordinates

chrLK033330:-:26572..34208

Molecular Weight (calculated)

66795.8 Da

IEP (calculated)

8.394

GRAVY (calculated)

-0.337

Length

575 amino acids

Sequence
(BLAST)

001: METISLLGPK HGSQFFLLSP NNLFPVRKLS CFPPKSLPTK PSEYVRLKAM TSPTCDEQTS NRKYMKLLPS PWTDRFHSVS DDVSEMDALT KEMDVLSPKV
101: KNKLMSFQGS DSTKKRILMI YVLVSLGLAH HFKDEINETL QEGFEKIEEM MDGEDDLYTV SIIFWVFRRY GHNISSDIFR RFKMNNGCFK YSLTGDAKGM
201: LSLYEATHLR TRKDDILDEA LIFTSSHLNS IAACGTCPSL LSVRIQSALI LSQHWNMEIL VPLEYIPFYE QEKDHDEMLL KFAKLNFKFL QLQYLQELKI
301: ITKNIIYYQW YNELGFASNL PPYFRDRIVE NYFFVLPIFI EPQLLRSRML LTQFFTSLEI LDDTFDRYAS LPEAESLFNS LKRWAPDDAM DKQPDYLKFV
401: LNSIFKIFED LERVLKTEGR LYSLDATKDE FKIGAKANFD LAKWGLTATK EAYEWLKSRP KLVKALCIKG RLRNDITGYE DDMSRGYVTN AINCYMKQYG
501: VPLEEAIREL NKIVADADKT LNEEFLTTVA VGRGVLKAAM DFGRMIATTY NVDEGSKEKS RRVHKKKKKK ILDKR

Best Arabidopsis Sequence Match ( AT4G20200.1 )
(BLAST)

001: MEATSVFWPK LGSQIFLSSS TNLWPLSKLY GFHLTSFPSK PLKHIRLKAT NTLTFDDQER IRKFKKLPTS EWTHYGHSIS IDVSEMDALR KEIDALKPIL
101: KSTLMSFKGI DSTKKRILMI YLLVSLGLAY HFEEEIYETL KMSFENIDKM MDGEDDLYTV SIIFWVFRRH GYHISYGVFQ RFKGSNGNFK ESLTRDAKGM
201: LSLYEAANLG TTKDFILEEA LSFTSSHLES LAASGTCPPH LSVRIRNALG LSQHWNMEML VPVEFIPFYE QEIEHDEMLL KFAKLSFKLG QLQYLQELKT
301: LTKWYKELDF ATNLPPYFRD RIVEHHFLVQ AVFFSPQLSR ERIMMIQYFT GLALLDDTFD RYASLHEAES LANSLERWAP DQAMDKQPDY LRFVLNFILD
401: TFEEFKRELG PEERSYSVNA TIEEFKAAAK ANIDLEKWAQ ADHIPSFEEY MEVGEVEVTV YASLAGIFMS MGKMATKEAF EWLKSRPKLV QYLSIKGRLM
501: NDLMGYEDDM SRGYVTNAVN CYMKQYGVTK EEAFRELYKI VVAANKTLNE EFLSTTGVPH FLLKATIDLA RMMTVAYNVN EGFTNPQGKI KEYMTSMFVD
601: QIHI

Arabidopsis Description

TPS07Putative terpenoid synthase 7 [Source:UniProtKB/Swiss-Prot;Acc:O65434]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.