CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytoskeleton, cytosol

Predictor Summary:

nucleus 1
cytosol 1
mitochondrion 1
cytoskeleton 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytoskeleton, cytosol, plastid
Any Predictor:	cytoskeleton, cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytoskeleton
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra021563.1-P	Field mustard	cytoskeleton, cytosol, plastid	97.85	97.85
CDY32356	Canola	plastid	81.4	73.39
CDY39119	Canola	plastid	77.46	71.93
AT3G29410.1	Thale cress	plastid	72.63	67.33
CDX82478	Canola	cytosol	56.35	58.66
CDX98470	Canola	plastid	61.0	58.39
CDX87217	Canola	plastid	60.64	56.41
CDY02143	Canola	plastid	55.46	56.06
CDX82477	Canola	plastid	29.34	54.67
CDY67821	Canola	cytosol	18.78	54.12
CDX82475	Canola	plastid	54.38	52.32
CDX75776	Canola	plastid	54.38	51.79
CDY06577	Canola	cytosol	28.98	49.39
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	32.74	48.03
CDY27296	Canola	cytosol	16.46	47.18
CDY18347	Canola	cytosol	13.42	45.18
VIT_18s0001g04200.t01	Wine grape	cytosol	9.48	44.54
CDX75775	Canola	plastid	37.39	43.18
CDY68962	Canola	cytosol	37.92	42.06
PGSC0003DMT400050941	Potato	cytosol	18.43	41.2
CDY69236	Canola	cytosol	35.6	41.12
CDX98661	Canola	cytosol	39.71	39.86
CDX74453	Canola	cytosol	36.67	38.61
PGSC0003DMT400075074	Potato	cytosol	14.13	37.98
CDY14933	Canola	cytosol	32.92	37.7
CDY14934	Canola	cytosol	1.07	37.5
CDY63249	Canola	cytosol	37.21	37.41
CDY70719	Canola	cytosol	23.26	37.36
CDX95274	Canola	cytosol	8.59	36.09
CDY71184	Canola	cytosol	21.29	35.63
CDY49723	Canola	plastid	37.92	35.57
PGSC0003DMT400070310	Potato	cytosol	19.5	35.05
CDX76457	Canola	plastid	37.57	34.94
CDY41707	Canola	plastid	35.96	34.54
Solyc01g101220.1.1	Tomato	cytosol	10.38	34.52
CDY23121	Canola	cytosol	23.26	34.21
PGSC0003DMT400079785	Potato	cytosol	18.78	33.76
CDY09324	Canola	plastid	36.14	33.72
Solyc01g101190.2.1	Tomato	cytosol	33.27	33.7
CDX76471	Canola	plastid	36.14	33.5
CDY54565	Canola	plastid	34.35	33.39
CDX95273	Canola	plastid	24.87	33.17
CDX98659	Canola	plastid	36.67	33.17
CDY13053	Canola	extracellular	32.74	33.09
CDY42473	Canola	cytosol	32.92	32.74
PGSC0003DMT400047124	Potato	cytosol	17.89	32.15
CDY09325	Canola	plastid	14.85	30.74
CDY01639	Canola	cytosol	10.55	30.57
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.64	30.0
CDY66920	Canola	cytosol	17.35	29.31
VIT_18s0001g04510.t01	Wine grape	plastid	15.92	29.09
CDY54750	Canola	cytosol	20.39	28.43
CDY62515	Canola	cytosol	20.21	28.18
GSMUA_Achr6P24330_001	Banana	cytosol	6.98	27.66
Os02t0458100-01	Rice	plastid	19.32	27.62
GSMUA_Achr6P24340_001	Banana	cytosol	7.33	27.52
CDY53129	Canola	cytosol	12.16	26.56
CDY53648	Canola	cytosol	12.16	26.56
CDX76827	Canola	plastid	26.48	26.48
CDX90785	Canola	plastid	28.09	26.48
CDX83558	Canola	plastid	27.19	25.81
CDY13587	Canola	plastid	27.01	25.64
CDX83560	Canola	plastid	24.87	24.6
CDY21487	Canola	plastid	25.94	24.37
CDX83208	Canola	plastid	25.94	24.37
CDY68676	Canola	cytosol	16.1	23.94
CDY15827	Canola	cytosol	6.44	23.23
CDY13589	Canola	plastid	23.08	23.16
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.2	22.71
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	26.48	21.67
CDY12909	Canola	cytosol	8.77	21.12
VIT_18s0001g05430.t01	Wine grape	cytosol	18.07	20.95
KRG93110	Soybean	mitochondrion	10.55	19.93
CDY68788	Canola	endoplasmic reticulum, golgi	14.67	19.52
CDY61957	Canola	plastid	11.45	16.93
CDY12910	Canola	plastid	4.47	16.78

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078HP07	UniProt:A0A078HP07	EnsemblPlants:CDY39124
ProteinID:CDY39124	ProteinID:CDY39124.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	GO:GO:0046872	EnsemblPlantsGene:GSBRNA2T00067292001
InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225
PANTHER:PTHR31225:SF22	SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf
InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EEC61A	SEG:seg	:	:

Description

BnaA01g29320DBnaA01g29320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HP07]

Coordinates

chrLK032440:-:314838..317036

Molecular Weight (calculated)

65043.9 Da

IEP (calculated)

5.265

GRAVY (calculated)

-0.322

Length

559 amino acids

Sequence
(BLAST)

001: MTKHDLSCVQ AESSGYLEST RPLTYFSPST WGDYFLSVPN DDSEFEALEQ EIESVMKPKV RDILICPNSC DKEKIRIIHL LISLAIAHYF ESEIEEILHQ
101: AFLKLDYLIS EEDDLETIAI MFEVFRLYQH KMSCDVFERF KGEDGKFKES VAHDVRGMLQ LYEAGHLGLP SEDIMDDALT FTRHHLGSLT GEETSPNLFE
201: QIQRTLYRAR YHNIEIVVAR QYISFYEQEE RHDEMLLKFA KLNFNFCQMH YIKELKIVTK LWKELGMTPK LSYIRDRIVE AFIFAVGLFF EPRYSRGRIH
301: ATILSKIASV VDDTCDAYAT LSEVISFHDA FQRWDLGAME ELPTNMRIVY KNTLEIVEEI DREMRARGKF GRLQPTIDEF KSLMKLYLTT AKWARAGHVP
401: SFEDYMENGS SSSGLDDYAA YAYISMDDCD EQQLKEWFNS KPKIFKASNN IFRLRNDIAT FEQEMSRGEV ANGVNCYMKQ HGVTKEAAVE VLRKMEREKF
501: KIMIEEFVLT KAVPRQILLR ATNSARMIDL FYKEGDGYGH PDQKLKDIIA SVFLHPVPL

Best Arabidopsis Sequence Match ( AT3G29410.1 )
(BLAST)

001: MEASKCFGPR TLPIIHNVPL CLKTNFSLFP CRLLQSQSLS SKKSTKHYLF RVKAETSGDL ESTRPLTYFS PSYWGDHFLS VSIDDSEFEA LEKEIETVFK
101: PKVRDMLMSP HSSDKERIRL IHLLISLGIA YYYENEIEEI LHKAYGKLAC LISDEDDLET IAIMFEVFRL YGHKMPCDVF ERFKSEDGKF KESLVGDVRG
201: LLQLYEAAHL GAPSEDIMDE ALSFARYHLE PLAGTETSSN LFKHVENVLY RARYHSIEIL VARQYISFYD QEEDQDETLL RFSKLNFNFC QMHYVKELKI
301: VTRWWKELGI ASKLPYSIRE RNVETYLGGL GVLFEPRYSL ARIFLAKLTL IMTVVDDTCD AYATLPEVQS LHDAFHRWDL RAMEELPRYM RIIYQSVFET
401: VEDIDREMIA RGKHGRLQLT IDEIKSLMIW YLGIAKWARS DQVPSFEDYM EIGTPSSALD DFASYGFIAM DDCDQKQLKE WFYSKPKIFH ALNALFRIRN
501: DIVTFEQEMS RGEVANGVNC YMKQHGVTKE AAVEELRKME RESYKIMIEE FMTSKAMPRQ ILVRPVNIAR VMDLFYKEAD GFGHPDQKLL QLIASLFLHP
601: IPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.