CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY39119	Canola	plastid	63.7	61.79
CDY39124	Canola	cytoskeleton, cytosol, plastid	58.39	61.0
CDX82478	Canola	cytosol	53.08	57.73
CDY32356	Canola	plastid	61.13	57.58
CDX87217	Canola	plastid	58.56	56.91
CDY02143	Canola	plastid	53.25	56.24
CDX82477	Canola	plastid	28.6	55.67
CDX82475	Canola	plastid	54.11	54.39
CDX75776	Canola	plastid	53.25	52.98
CDY06577	Canola	cytosol	29.62	52.74
CDY67821	Canola	cytosol	17.12	51.55
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	32.19	49.34
CDY27296	Canola	cytosol	15.75	47.18
CDX75775	Canola	plastid	37.33	45.04
CDY14934	Canola	cytosol	1.2	43.75
CDY69236	Canola	cytosol	34.59	41.74
CDY68962	Canola	cytosol	34.42	39.88
CDY14933	Canola	cytosol	33.05	39.55
CDX74453	Canola	cytosol	35.62	39.17
CDX98661	Canola	cytosol	36.13	37.88
CDX95274	Canola	cytosol	8.56	37.59
CDY18347	Canola	cytosol	10.62	37.35
CDY63249	Canola	cytosol	35.1	36.87
CDY41707	Canola	plastid	36.64	36.77
PGSC0003DMT400070310	Potato	cytosol	19.52	36.66
PGSC0003DMT400075074	Potato	cytosol	13.01	36.54
CDY71184	Canola	cytosol	20.72	36.23
VIT_18s0001g04200.t01	Wine grape	cytosol	7.36	36.13
PGSC0003DMT400050941	Potato	cytosol	15.41	36.0
PGSC0003DMT400079785	Potato	cytosol	18.84	35.37
PGSC0003DMT400047124	Potato	cytosol	18.84	35.37
CDX95273	Canola	plastid	25.34	35.32
CDY70719	Canola	cytosol	20.89	35.06
CDY42473	Canola	cytosol	33.73	35.05
CDY09325	Canola	plastid	16.1	34.81
CDY49723	Canola	plastid	35.27	34.56
CDX76457	Canola	plastid	35.45	34.44
Solyc01g101190.2.1	Tomato	cytosol	32.53	34.42
CDX98659	Canola	plastid	35.62	33.66
CDY09324	Canola	plastid	34.42	33.56
CDX76471	Canola	plastid	33.9	32.84
CDY13053	Canola	extracellular	30.14	31.83
CDY54565	Canola	plastid	31.34	31.83
CDY23121	Canola	cytosol	20.21	31.05
Solyc01g101220.1.1	Tomato	cytosol	8.73	30.36
VIT_18s0001g04510.t01	Wine grape	plastid	14.73	28.1
CDY01639	Canola	cytosol	9.25	27.98
CDY54750	Canola	cytosol	18.49	26.93
CDY62515	Canola	cytosol	18.32	26.68
CDY66920	Canola	cytosol	15.07	26.59
Os02t0458100-01	Rice	plastid	17.29	25.83
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.7	25.81
CDX76827	Canola	plastid	24.66	25.76
CDX90785	Canola	plastid	26.03	25.63
CDY68676	Canola	cytosol	15.92	24.73
CDY53129	Canola	cytosol	10.62	24.22
CDY53648	Canola	cytosol	10.62	24.22
CDY21487	Canola	plastid	24.66	24.2
CDX83208	Canola	plastid	24.32	23.87
CDY13587	Canola	plastid	23.97	23.77
CDX83558	Canola	plastid	23.8	23.6
CDY15827	Canola	cytosol	6.16	23.23
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.93	23.11
CDX83560	Canola	plastid	22.26	23.01
GSMUA_Achr6P24330_001	Banana	cytosol	5.31	21.99
CDY13589	Canola	plastid	20.38	21.36
GSMUA_Achr6P24340_001	Banana	cytosol	5.31	20.81
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	23.8	20.35
VIT_18s0001g05430.t01	Wine grape	cytosol	16.27	19.71
KRG93110	Soybean	mitochondrion	9.42	18.58
CDY12909	Canola	cytosol	7.36	18.53
CDY68788	Canola	endoplasmic reticulum, golgi	13.01	18.1
CDY61957	Canola	plastid	10.62	16.4
CDY12910	Canola	plastid	4.11	16.11

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078E8Q6	EnsemblPlants:CDX98470	ProteinID:CDX98470
ProteinID:CDX98470.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00106091001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EF3021	SEG:seg	:	:	:	:

Description

BnaC05g39050D

Coordinates

chrLK031905:-:340942..343690

Molecular Weight (calculated)

67199.1 Da

IEP (calculated)

5.678

GRAVY (calculated)

-0.180

Length

584 amino acids

Sequence
(BLAST)

001: MEAARIGLGP NNLHLLCNTN KLSLFPRRLL QHNAFSSKNP LKHGLSLRVR ATTESSSGDL ESTRPLANFP PSFWGDYFLS VHVDESKFDA LATEIESVMQ
101: PKVRVRLLSP DSGDKEKIRL IHLLISLGIA HYYENEIEEI LDHAFKNLDA LIKDECDLET IAIMFEVFRL YRHKMSCDAF DRFKGEDGRL KESLGTDIRG
201: MLQFFTRNHL ESLAKSASPH LSKHIQKQLY IPRYLCSEIV VAREYISFYE QEEGHDETLL KFAKLNFNFC QLTYVKELKD ITKWWSDLDF ATKLPFVRNR
301: CVEIYLAGLA LYVEPRYSVG RVYAAKLTML LTCVDDICDA YATVPEVASL VDAFQRWDLS TIEELPSYMR IIYREVLGYV EEIDREMRAR GRSQSVQPTI
401: DECKSLVIAY LEIAKWARAG HVPSFDEYMK VGLLTAGMDD LAAYGYIAMH DDCDEKQLIE WFYSKPKIIQ ALSSYFRIQN DIASFEVEMG RGEVANGVNC
501: YMKQYGVTKE EAVEEMGKMA EESYKIMMNE FMVSNITMPR QIVVRIINIA RVIAVYYREG EGFTYPDGTL KDRLASLFIK PIPL

Best Arabidopsis Sequence Match ( AT3G29410.1 )
(BLAST)

001: MEASKCFGPR TLPIIHNVPL CLKTNFSLFP CRLLQSQSLS SKKSTKHYLF RVKAETSGDL ESTRPLTYFS PSYWGDHFLS VSIDDSEFEA LEKEIETVFK
101: PKVRDMLMSP HSSDKERIRL IHLLISLGIA YYYENEIEEI LHKAYGKLAC LISDEDDLET IAIMFEVFRL YGHKMPCDVF ERFKSEDGKF KESLVGDVRG
201: LLQLYEAAHL GAPSEDIMDE ALSFARYHLE PLAGTETSSN LFKHVENVLY RARYHSIEIL VARQYISFYD QEEDQDETLL RFSKLNFNFC QMHYVKELKI
301: VTRWWKELGI ASKLPYSIRE RNVETYLGGL GVLFEPRYSL ARIFLAKLTL IMTVVDDTCD AYATLPEVQS LHDAFHRWDL RAMEELPRYM RIIYQSVFET
401: VEDIDREMIA RGKHGRLQLT IDEIKSLMIW YLGIAKWARS DQVPSFEDYM EIGTPSSALD DFASYGFIAM DDCDQKQLKE WFYSKPKIFH ALNALFRIRN
501: DIVTFEQEMS RGEVANGVNC YMKQHGVTKE AAVEELRKME RESYKIMIEE FMTSKAMPRQ ILVRPVNIAR VMDLFYKEAD GFGHPDQKLL QLIASLFLHP
601: IPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.