CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra012513.1-P	Field mustard	cytosol	84.56	99.16
CDY70719	Canola	cytosol	56.01	89.66
CDY69236	Canola	cytosol	73.07	84.09
CDY68962	Canola	cytosol	75.94	83.93
CDY18347	Canola	cytosol	16.88	56.63
CDY14934	Canola	cytosol	1.62	56.25
AT4G20210.1	Thale cress	plastid	59.07	54.83
CDX76457	Canola	plastid	58.53	54.24
CDY49723	Canola	plastid	57.27	53.52
CDY23121	Canola	cytosol	35.73	52.37
CDX98659	Canola	plastid	57.81	52.1
CDX76471	Canola	plastid	55.83	51.58
CDY09324	Canola	plastid	54.58	50.75
CDY41707	Canola	plastid	52.06	49.83
CDX95273	Canola	plastid	37.34	49.64
CDX95274	Canola	cytosol	11.85	49.62
CDX74453	Canola	cytosol	47.04	49.34
CDY13053	Canola	extracellular	48.83	49.19
CDY54565	Canola	plastid	50.27	48.7
CDY14933	Canola	cytosol	42.01	47.95
CDY63249	Canola	cytosol	47.4	47.48
CDY01639	Canola	cytosol	16.34	47.15
CDY71184	Canola	cytosol	27.83	46.41
CDY42473	Canola	cytosol	46.68	46.26
CDY67821	Canola	cytosol	14.72	42.27
CDY09325	Canola	plastid	20.29	41.85
CDX82478	Canola	cytosol	39.14	40.6
CDY06577	Canola	cytosol	23.88	40.55
CDY27296	Canola	cytosol	14.18	40.51
VIT_18s0001g04200.t01	Wine grape	cytosol	8.62	40.34
CDY39124	Canola	cytoskeleton, cytosol, plastid	39.86	39.71
PGSC0003DMT400050941	Potato	cytosol	17.59	39.2
CDX82477	Canola	plastid	21.01	39.0
PGSC0003DMT400075074	Potato	cytosol	14.36	38.46
CDX75776	Canola	plastid	39.86	37.82
CDY39119	Canola	plastid	40.75	37.71
PGSC0003DMT400070310	Potato	cytosol	20.47	36.66
CDY32356	Canola	plastid	40.4	36.29
CDX98470	Canola	plastid	37.88	36.13
CDX82475	Canola	plastid	37.52	35.97
CDX87217	Canola	plastid	38.78	35.94
CDY02143	Canola	plastid	35.37	35.62
PGSC0003DMT400079785	Potato	cytosol	19.03	34.08
Solyc01g101190.2.1	Tomato	cytosol	33.57	33.88
Solyc01g101220.1.1	Tomato	cytosol	9.87	32.74
PGSC0003DMT400047124	Potato	cytosol	18.13	32.48
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	21.18	30.97
CDY15827	Canola	cytosol	8.08	29.03
CDX75775	Canola	plastid	24.78	28.51
CDY66920	Canola	cytosol	16.16	27.19
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.9	26.77
Os02t0458100-01	Rice	plastid	17.95	25.58
VIT_18s0001g04510.t01	Wine grape	plastid	14.0	25.49
CDY62515	Canola	cytosol	17.95	24.94
CDY54750	Canola	cytosol	17.95	24.94
CDX90785	Canola	plastid	26.39	24.79
CDX76827	Canola	plastid	24.78	24.69
CDY68676	Canola	cytosol	16.16	23.94
CDY21487	Canola	plastid	25.31	23.7
KRG93110	Soybean	mitochondrion	12.57	23.65
CDX83208	Canola	plastid	24.96	23.36
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.41	23.11
CDX83558	Canola	plastid	24.42	23.09
CDY13587	Canola	plastid	23.88	22.58
CDX83560	Canola	plastid	22.62	22.3
CDY53129	Canola	cytosol	10.23	22.27
CDY53648	Canola	cytosol	10.23	22.27
GSMUA_Achr6P24330_001	Banana	cytosol	5.57	21.99
CDY12909	Canola	cytosol	9.16	21.98
CDY13589	Canola	plastid	21.72	21.72
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	26.21	21.38
CDY68788	Canola	endoplasmic reticulum, golgi	15.8	20.95
GSMUA_Achr6P24340_001	Banana	cytosol	5.39	20.13
VIT_18s0001g05430.t01	Wine grape	cytosol	17.41	20.12
CDY61957	Canola	plastid	11.67	17.2
CDY12910	Canola	plastid	3.59	13.42

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078EBW3	EnsemblPlants:CDX98661	ProteinID:CDX98661
ProteinID:CDX98661.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00106714001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EEC8DD	SEG:seg	:	:	:	:

Description

BnaA03g44460D

Coordinates

chrLK031906:-:501017..510611

Molecular Weight (calculated)

64776.0 Da

IEP (calculated)

5.247

GRAVY (calculated)

-0.267

Length

557 amino acids

Sequence
(BLAST)

001: MGSQTGFDHG SVRTFKMLQP SQWDDYFLYA PIDELELDVF ASELEAIKPN VRDMLMSSSP AELGHGSAKR KVLLIYLMTS LGVAYHFENE IEKTLAHAFE
101: KIDDMIANEH DLYTISIFFW VFRTYGYNMS ADAFKRFKGD DGMFMDSLAK DAEGMLGLYE AAHLRTTRDY IMDEALSFTM EHMESLAGRA RPHLSRLIQN
201: ALGLSQHWNM EILVAMEFIS FYEQEEDHDE TLFKFSKLNF KLLQLIYLKE LKMVTKWYKE LDFASKLPPY YRDRIVELHF FVISMYFEPQ FSSARIMLTK
301: FYTVETITDD TFDRYASISE AESLANSLER WAPDKDMDTQ PDYLKFVFKF ILDAFKDFER EVRSEGRSYS VKGTIEEFKR LVKSNLDLAK WVQIAHVPSF
401: EDYMEVGEVE ITMYATMAGT LMGMGHIATK ETYEWLKSRP KLIQSLSING RLMNDMAGFE DDMSRGYVTT GVNCYMKQFG VTKSEAFKKL HQMRVDNDKI
501: VNEELLKIKD VPKRVLKEAI NCARMTHVAY GYGEGLTHPE GKIKEYIIAL YIDLIRL

Best Arabidopsis Sequence Match ( AT4G20210.1 )
(BLAST)

001: MEAIKTFSPK FGFQISLSPR THLTPVRFPP TACPVKPANL VRLKATRALI RDPQESNRKF QKFPPSEWTN RFDSVSVDAS EMDALRKEID KIIPNVKKEL
101: MSSQGIESTK KKILMVYLLV SLGLAYHFED EIEECLKEGF ETIEEMMAGE DNLYTISIIF LVLRTYGHHM SSDIFQKFKG NDGNFKGCIS GDAKGLLALY
201: EAAQLRTTTE YIMEEALSFT SSNLELLAAD GRCPPHLSKH IRNALGLSQH KQMEVLVAVE YISFYEQEKD HDKILLKFAK LNFKLMQLHY LEELKVVTKW
301: YKEHDFASNL PPYFKYVIVE NHFFAITMYF EPKFSQKRIM LAKYFTVLVL LDDTCDRYAS LSEAESLTNS LERWAPDDAM DKQPHYLKFV FKFIMGCFEE
401: FERELASEGR SYSVKATLEE FKTIVKANFD FAKLAHTGHV PSFKEYMEVG EVEVGVCATL AGNLMCIGHI GDEGVYEWLK SRPKFLKAAS TYGRLMNDIA
501: GFEDDMKREY VITGVNTYMK QYGLTKMEAI RELQNLVEYN HTIMNEEFLK TTDLPRQIRK QVINVARSLN VSYTEGEGFT HTKGKVDEYI TSLFITPIRI

Arabidopsis Description

TPS08Terpenoid synthase 8 [Source:UniProtKB/Swiss-Prot;Acc:O65435]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.