CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13587	Canola	plastid	97.79	97.79
CDY66920	Canola	cytosol	48.39	86.1
CDX83560	Canola	plastid	70.12	73.1
CDY13589	Canola	plastid	68.25	72.17
CDX76827	Canola	plastid	63.5	66.91
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	73.68	63.54
CDX90785	Canola	plastid	62.48	62.06
CDY53129	Canola	cytosol	26.83	61.72
CDY53648	Canola	cytosol	26.83	61.72
CDX83208	Canola	plastid	61.63	61.01
CDY21487	Canola	plastid	60.95	60.34
CDY15827	Canola	cytosol	15.62	59.35
CDY54750	Canola	cytosol	37.52	55.11
VIT_13s0067g00300.t01	Wine grape	cytosol	14.6	54.43
CDY62515	Canola	cytosol	36.84	54.11
VIT_13s0067g03770.t01	Wine grape	cytosol	31.75	53.89
CDY68676	Canola	cytosol	34.3	53.72
VIT_13s0067g00090.t01	Wine grape	cytosol	31.92	53.71
VIT_13s0067g00320.t01	Wine grape	cytosol	10.19	50.85
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	21.56	50.6
VIT_00s2271g00010.t01	Wine grape	cytosol	33.28	49.62
VIT_00s0724g00010.t01	Wine grape	cytosol	35.82	49.41
VIT_13s0067g03740.t01	Wine grape	cytosol	34.47	48.1
VIT_13s0084g00010.t01	Wine grape	cytosol	44.65	47.73
Solyc02g079840.1.1	Tomato	cytosol	43.29	47.4
VIT_13s0067g03700.t01	Wine grape	cytosol	44.99	46.82
PGSC0003DMT400089009	Potato	cytosol	12.56	45.96
PGSC0003DMT400055897	Potato	cytosol	9.17	44.63
VIT_13s0067g00130.t01	Wine grape	plastid	39.05	44.15
VIT_13s0067g00370.t01	Wine grape	plastid	44.14	44.07
CDY68788	Canola	endoplasmic reticulum, golgi	31.41	44.05
VIT_13s0067g03790.t01	Wine grape	plastid	43.29	43.0
GSMUA_Achr4P07690_001	Banana	cytosol	12.39	42.69
VIT_13s0019g00060.t01	Wine grape	plastid	42.95	42.59
VIT_13s0067g03830.t01	Wine grape	plastid	29.54	39.55
CDY14934	Canola	cytosol	1.02	37.5
KRH22502	Soybean	cytosol	8.49	28.57
CDY12909	Canola	cytosol	11.04	28.02
CDY39124	Canola	cytoskeleton, cytosol, plastid	25.81	27.19
CDX95274	Canola	cytosol	6.11	27.07
CDX87217	Canola	plastid	27.5	26.96
CDY68962	Canola	cytosol	22.24	25.99
CDY18347	Canola	cytosol	7.3	25.9
CDY02143	Canola	plastid	24.28	25.86
CDY69236	Canola	cytosol	20.71	25.21
CDX98659	Canola	plastid	26.15	24.92
CDY09324	Canola	plastid	24.96	24.54
CDX98661	Canola	cytosol	23.09	24.42
CDY06577	Canola	cytosol	13.58	24.39
CDY13053	Canola	extracellular	22.75	24.23
CDX82478	Canola	cytosol	21.9	24.02
CDX76457	Canola	plastid	24.45	23.96
CDY39119	Canola	plastid	24.45	23.92
CDX98470	Canola	plastid	23.6	23.8
CDX82475	Canola	plastid	23.43	23.75
CDX75776	Canola	plastid	23.6	23.68
CDY12910	Canola	plastid	5.94	23.49
CDY23121	Canola	cytosol	15.11	23.42
CDY32356	Canola	plastid	24.62	23.39
CDY61957	Canola	plastid	14.94	23.28
CDY70719	Canola	cytosol	13.75	23.28
CDY49723	Canola	plastid	23.43	23.15
CDY42473	Canola	cytosol	22.07	23.13
CDY27296	Canola	cytosol	7.64	23.08
CDY41707	Canola	plastid	22.58	22.85
CDX76471	Canola	plastid	23.26	22.72
CDY63249	Canola	cytosol	21.39	22.66
CDY71184	Canola	cytosol	12.73	22.46
CDY54565	Canola	plastid	21.9	22.43
CDX74453	Canola	cytosol	20.2	22.41
CDY14933	Canola	cytosol	18.51	22.34
CDX95273	Canola	plastid	15.45	21.72
CDY67821	Canola	cytosol	7.13	21.65
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	13.75	21.26
CDY01639	Canola	cytosol	6.96	21.24
CDY09325	Canola	plastid	9.68	21.11
CDX82477	Canola	plastid	10.19	20.0
CDX75775	Canola	plastid	14.77	17.98

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078D8E5	EnsemblPlants:CDX83558	ProteinID:CDX83558
ProteinID:CDX83558.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00139204001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EE8957	SEG:seg	:	:	:	:

Description

BnaC07g22980D

Coordinates

chrLK031833:+:646562..649633

Molecular Weight (calculated)

68773.6 Da

IEP (calculated)

6.269

GRAVY (calculated)

-0.341

Length

589 amino acids

Sequence
(BLAST)

001: MATFCMSSPP IYINAFTSNV RLRRFACKSM TKMKSDDVSV DLCRRSGNYQ PSPWDHHSLL AITNKYANEK EVITRDVLKK KMKKILDVEL KTSLEQLELI
101: DDLQKLGISH HFELEIKDIL TDLHHKNEKH LWNCDKEEDL HATALEFRLL RQHGFEISED VFDVIVNKIE SVTFKSDDIK SIITLYEASY LSSKSDTKLY
201: KVIRPFATEK LREYVNSDRN NETYKTREKA IHALEMPYHW RMRRLETRWY IDAYEKKHDM NLALMELAKI DFNIVQASHQ EELKYVSSWW KEACLSNQLP
301: FVRDGIVENY FWNVGIIYEP QFGYTRRFMT IISALIITID DIYDIYGTLE ELELFTAMVD NWNVNGLDEL PEYMRLCFLV LYNEINGIGC DILKHKNINV
401: IPFLKKSWTD LCKAYLVEAK WYKRGYKPSL EEYMQNAWIS TSVPAMLIHF YCVFSDQISI QILESLSEHR QNVVRCSATV LRLANDLATS PDELARGDVL
501: KSVQCYMHET GASEEEARGH VQQMISDTWN EMNYEAKIAL LPRGFVEATV NLARMSQCIY QHGDGHGRPD KAKTVERVMS LFVSPVPLD

Best Arabidopsis Sequence Match ( AT3G25830.1 )
(BLAST)

001: MATLRISSAL IYQNTLTHHF RLRRPHRFVC KSMTKTTPDT TLVELSRRSG NYQPSPWNHC YLLSIENKYA SETEVITRDV LKKKVKSMLD DEKKSRLEQL
101: ELIDDLQKLG VSYHFEIEIN DTLTDLHLKM GRNCWKCDKE EDLHATSLEF RLLRQHGFDV SENIFDVIID QIESNTFKTN NINGIISLYE ASYLSTKSDT
201: KLHKVIRPFA TEQIRKFVDD EDTKNIEVRE KAYHALEMPY HWRMRRLDTR WYIDAYEKKH DMNLVLIEFA KIDFNIVQAA HQEDLKYVSR WWKDTCLTNQ
301: LPFVRDRIVE NYFWTVGLIY EPQFGYIRRI MTIVNALVTT IDDIYDIYGT LEELELFTSM VENWDVNRLG ELPEYMRLCF LILYNEINGI GCDILKYKKI
401: DVIPYLKKSW ADLCRTYLVE AKWYKRGYKP SLEEYMQNAW ISISAPTILI HFYCVFSDQI SVQNLETLSQ HRQHIVRCSA TVLRLANDLG TSPTELARGD
501: VLKSVQCYMH ETGASEERAR DHVHQMISDM WDDMNSETKT ACNSSSRSRG FKEAAMNLAR MSQCMYQYGD GHGCPEKAKT IDRVQSLLVD PIPLDVNRLG

Arabidopsis Description

TPS271,8-cineole synthase 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P0DI77]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.