Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 72.56 | 39.47 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 44.51 | 38.32 |
| CDY27296 | Canola | cytosol | 22.26 | 37.44 |
| CDX82478 | Canola | cytosol | 59.45 | 36.31 |
| CDX95274 | Canola | cytosol | 13.11 | 32.33 |
| CDY14934 | Canola | cytosol | 1.52 | 31.25 |
| CDX82475 | Canola | plastid | 54.57 | 30.81 |
| CDX98470 | Canola | plastid | 52.74 | 29.62 |
| CDX75776 | Canola | plastid | 52.13 | 29.13 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 49.39 | 28.98 |
| CDY39119 | Canola | plastid | 52.44 | 28.57 |
| CDY71184 | Canola | cytosol | 28.66 | 28.14 |
| CDY32356 | Canola | plastid | 53.05 | 28.06 |
| CDY02143 | Canola | plastid | 46.65 | 27.67 |
| CDX87217 | Canola | plastid | 50.61 | 27.62 |
| CDY68962 | Canola | cytosol | 41.77 | 27.18 |
| CDY69236 | Canola | cytosol | 39.63 | 26.86 |
| CDY67821 | Canola | cytosol | 15.85 | 26.8 |
| CDY23121 | Canola | cytosol | 30.79 | 26.58 |
| PGSC0003DMT400075074 | Potato | cytosol | 16.46 | 25.96 |
| CDY18347 | Canola | cytosol | 13.11 | 25.9 |
| PGSC0003DMT400070310 | Potato | cytosol | 23.78 | 25.08 |
| CDX98661 | Canola | cytosol | 40.55 | 23.88 |
| PGSC0003DMT400079785 | Potato | cytosol | 22.26 | 23.47 |
| Solyc01g101220.1.1 | Tomato | cytosol | 11.59 | 22.62 |
| CDY70719 | Canola | cytosol | 23.48 | 22.13 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 7.93 | 21.85 |
| CDX74453 | Canola | cytosol | 35.37 | 21.85 |
| CDY13053 | Canola | extracellular | 36.59 | 21.7 |
| CDY41707 | Canola | plastid | 38.41 | 21.65 |
| PGSC0003DMT400050941 | Potato | cytosol | 16.46 | 21.6 |
| CDY63249 | Canola | cytosol | 35.67 | 21.04 |
| CDY62515 | Canola | cytosol | 25.61 | 20.95 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 8.84 | 20.57 |
| CDY66920 | Canola | cytosol | 20.73 | 20.54 |
| CDX75775 | Canola | plastid | 30.18 | 20.45 |
| CDY54750 | Canola | cytosol | 24.39 | 19.95 |
| CDY42473 | Canola | cytosol | 34.15 | 19.93 |
| CDY09324 | Canola | plastid | 36.28 | 19.87 |
| CDY14933 | Canola | cytosol | 29.27 | 19.67 |
| CDY54565 | Canola | plastid | 34.15 | 19.48 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 8.84 | 19.46 |
| CDX76471 | Canola | plastid | 35.67 | 19.4 |
| CDY49723 | Canola | plastid | 35.06 | 19.3 |
| CDX76457 | Canola | plastid | 34.76 | 18.97 |
| Solyc01g101190.2.1 | Tomato | cytosol | 31.71 | 18.84 |
| CDX98659 | Canola | plastid | 34.76 | 18.45 |
| CDX95273 | Canola | plastid | 23.48 | 18.38 |
| CDX82477 | Canola | plastid | 16.77 | 18.33 |
| PGSC0003DMT400047124 | Potato | cytosol | 17.07 | 18.01 |
| CDY53129 | Canola | cytosol | 13.41 | 17.19 |
| CDY53648 | Canola | cytosol | 13.41 | 17.19 |
| CDY12909 | Canola | cytosol | 11.28 | 15.95 |
| CDX83560 | Canola | plastid | 24.39 | 14.16 |
| CDX76827 | Canola | plastid | 23.78 | 13.95 |
| CDY13587 | Canola | plastid | 24.7 | 13.75 |
| CDX83558 | Canola | plastid | 24.39 | 13.58 |
| CDX90785 | Canola | plastid | 23.78 | 13.15 |
| CDY21487 | Canola | plastid | 23.78 | 13.11 |
| CDX83208 | Canola | plastid | 23.48 | 12.94 |
| CDY15827 | Canola | cytosol | 6.1 | 12.9 |
| Os02t0458100-01 | Rice | plastid | 15.24 | 12.79 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 11.59 | 12.26 |
| CDY13589 | Canola | plastid | 19.82 | 11.67 |
| CDY09325 | Canola | plastid | 9.45 | 11.48 |
| CDY68676 | Canola | cytosol | 13.11 | 11.44 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 22.87 | 10.98 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 9.76 | 10.46 |
| KRG93110 | Soybean | mitochondrion | 8.54 | 9.46 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 13.72 | 9.34 |
| CDY01639 | Canola | cytosol | 5.18 | 8.81 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 6.4 | 8.37 |
| CDY61957 | Canola | plastid | 9.45 | 8.2 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 9.15 | 7.14 |
| CDY12910 | Canola | plastid | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:A0A078F0D2 | EnsemblPlants:CDY06577 | ProteinID:CDY06577 |
| ProteinID:CDY06577.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0006629 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010333 | GO:GO:0016114 |
| GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00122708001 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF03936 |
| PANTHER:PTHR31225 | PANTHER:PTHR31225:SF22 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0004EEDE3C | : | : | : | : |
Description
BnaC02g13010D
Coordinates
chrLK031971:+:453005..458773
Molecular Weight (calculated)
38416.6 Da
IEP (calculated)
5.742
GRAVY (calculated)
-0.122
Length
328 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEALSFTRY HLESLASQEA TTPPLLSRHI LSRYVGALYR PRFLKMEIEA AREYIYFYQE EEGHNETLLT FAKVNFKLCQ LHYLQELETL TKWWKETNLA
101: YKLPYPRYSL GRIVVSKISI LMVVMDDTCD AYGSFAEVKS LIDSLQRWDL GAIDELPSHL RIFIQSIVDT SVQYTVEEIK RLGRAYANIS KWAQAGVRCF
201: AMYTFMAMED CDEDQTIEWF KSEPKMILAL CIIFRLENDM AGFELEMRRG EVANEVAVRE IKKIVRDNYK IVMEEFLTVK AVPRQILVRC INTIRLVNVY
301: YREGDGFSDP HRNLKDLITS LFINPLPF
101: YKLPYPRYSL GRIVVSKISI LMVVMDDTCD AYGSFAEVKS LIDSLQRWDL GAIDELPSHL RIFIQSIVDT SVQYTVEEIK RLGRAYANIS KWAQAGVRCF
201: AMYTFMAMED CDEDQTIEWF KSEPKMILAL CIIFRLENDM AGFELEMRRG EVANEVAVRE IKKIVRDNYK IVMEEFLTVK AVPRQILVRC INTIRLVNVY
301: YREGDGFSDP HRNLKDLITS LFINPLPF
001: MEAARMGFRA KTLPHLGNGT RLPLKTKLSL FPMHLLQNHT TLSRRSTKLN LCVKACSKTS GVESSRPLPH SAPDLWGDHI LSVPTENSEF DTLETEIESI
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL
Arabidopsis Description
TPS22Terpenoid synthase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ27]
SUBAcon: [mitochondrion,plastid]
SUBAcon: [mitochondrion,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.