Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06577 | Canola | cytosol | 39.47 | 72.56 |
| AT3G14490.1 | Thale cress | plastid | 57.71 | 57.9 |
| AT3G29410.1 | Thale cress | plastid | 57.21 | 57.21 |
| AT3G32030.1 | Thale cress | plastid | 56.88 | 56.79 |
| AT3G14540.1 | Thale cress | plastid | 52.4 | 52.49 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 52.74 | 52.3 |
| AT3G14520.1 | Thale cress | plastid | 51.74 | 51.57 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.46 | 42.86 |
| PGSC0003DMT400050941 | Potato | cytosol | 17.41 | 42.0 |
| AT5G44630.1 | Thale cress | cytosol | 37.31 | 40.4 |
| AT3G29110.1 | Thale cress | plastid | 38.64 | 39.16 |
| AT5G48110.1 | Thale cress | plastid | 21.72 | 38.64 |
| PGSC0003DMT400075074 | Potato | cytosol | 13.27 | 38.46 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 35.16 | 37.79 |
| AT4G15870.1 | Thale cress | plastid | 37.31 | 37.63 |
| AT1G66020.1 | Thale cress | plastid | 37.15 | 37.46 |
| AT4G13300.1 | Thale cress | cytosol | 33.83 | 36.82 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 36.65 | 36.65 |
| AT4G20210.1 | Thale cress | plastid | 36.15 | 36.33 |
| AT1G70080.1 | Thale cress | mitochondrion | 36.65 | 36.17 |
| AT3G29190.1 | Thale cress | plastid | 35.99 | 36.11 |
| AT4G13280.2 | Thale cress | cytosol | 33.17 | 36.1 |
| AT4G20200.1 | Thale cress | plastid | 35.82 | 35.76 |
| AT4G20230.2 | Thale cress | plastid | 35.49 | 34.57 |
| AT2G23230.2 | Thale cress | plastid | 34.16 | 33.72 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 16.75 | 33.01 |
| PGSC0003DMT400070310 | Potato | cytosol | 16.75 | 32.48 |
| PGSC0003DMT400047124 | Potato | cytosol | 16.75 | 32.48 |
| Solyc01g101190.2.1 | Tomato | cytosol | 29.68 | 32.43 |
| PGSC0003DMT400079785 | Potato | cytosol | 16.09 | 31.19 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 15.75 | 30.65 |
| Solyc01g101220.1.1 | Tomato | cytosol | 7.79 | 27.98 |
| Os02t0458100-01 | Rice | plastid | 17.91 | 27.62 |
| AT4G16730.1 | Thale cress | cytosol | 24.21 | 27.09 |
| AT4G16740.1 | Thale cress | mitochondrion | 25.04 | 26.73 |
| AT2G24210.1 | Thale cress | plastid | 24.38 | 24.87 |
| AT3G25830.1 | Thale cress | plastid | 24.05 | 24.17 |
| AT3G25820.1 | Thale cress | plastid | 24.05 | 24.17 |
| KRG93110 | Soybean | mitochondrion | 11.77 | 23.99 |
| AT3G25810.1 | Thale cress | plastid | 22.72 | 22.91 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 5.64 | 22.82 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 17.58 | 21.99 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 5.14 | 21.99 |
| AT1G61680.1 | Thale cress | plastid | 20.4 | 21.62 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:840266 | MapMan:9.1.4.2 | ProteinID:AAF97286.1 | ProteinID:AEE31620.1 |
| ArrayExpress:AT1G33750 | EnsemblPlantsGene:AT1G33750 | RefSeq:AT1G33750 | TAIR:AT1G33750 | RefSeq:AT1G33750-TAIR-G | EnsemblPlants:AT1G33750.1 |
| TAIR:AT1G33750.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009058 | GO:GO:0009987 | GO:GO:0010333 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016114 |
| GO:GO:0016829 | GO:GO:0046872 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | RefSeq:NP_174635.1 |
| PFAM:PF01397 | PFAM:PF03936 | PO:PO:0009005 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF22 | UniProt:Q9LQ27 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI000004832A | : | : | : | : |
Description
TPS22Terpenoid synthase 22 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQ27]
Coordinates
chr1:+:12233632..12236576
Molecular Weight (calculated)
69878.9 Da
IEP (calculated)
6.972
GRAVY (calculated)
-0.221
Length
603 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAARMGFRA KTLPHLGNGT RLPLKTKLSL FPMHLLQNHT TLSRRSTKLN LCVKACSKTS GVESSRPLPH SAPDLWGDHI LSVPTENSEF DTLETEIESI
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL
101: KPKVRNMLMS SHKTDKERIC LIHLLICLGT FHYFEKEIEE ILEQAFRKLD MLFTDEDDLE TTAIMFEVFR LYGHKISCDV FDRFKGVDAK FKEHLVSDVR
201: GMLQLYEAAH LATPFETILD EALSFTRYHL ESLAGQQATA PHISRHILNA LYKPRFLKME IIAAREYIHF YQKEGHDETL LKFAKLNFNF CQLHYVRELK
301: TLTKWWKDID LPYKLPYIRD RLLETFIGVM AVYLEPHYSL GRIIATKVSQ VIVVMDDTCD AYGTFSEVRS LIDSLERWDP GAIDKLPSCL RIVIQSIVET
401: MEDIEREMKP RGRSSSVQDT VEEIKIMGRA YAEISKWARA GHVPTFDDYI ELGLDSSGIR CFAMYSFISM EDCEENQTNA WFKSKPKMLR ALSVIFRLTN
501: DIAGFEEEMR RGEVVNGVNC YVKQHNVTKE LAVREIKKMI RDNYKIMMEE FLTIKSVSRP ILVRCFNIVR LVNLYYEEGD NFTNPNGKLK DLITSLFFHP
601: LPL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.