Factsheet for AT1G70080.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G48110.1	Thale cress	plastid	26.51	47.79
AT5G44630.1	Thale cress	cytosol	42.88	47.04
AT4G15870.1	Thale cress	plastid	42.72	43.65
AT3G29190.1	Thale cress	plastid	42.88	43.59
AT1G48820.1	Thale cress	mitochondrion, plastid	39.77	43.32
AT1G66020.1	Thale cress	plastid	42.39	43.31
AT1G48800.1	Thale cress	mitochondrion, plastid	42.55	43.12
AT2G23230.2	Thale cress	plastid	42.39	42.39
AT4G13300.1	Thale cress	cytosol	38.3	42.24
AT4G20200.1	Thale cress	plastid	41.41	41.89
AT4G20230.2	Thale cress	plastid	42.06	41.52
AT4G13280.2	Thale cress	cytosol	37.64	41.52
AT3G29110.1	Thale cress	plastid	40.26	41.34
PGSC0003DMT400050941	Potato	cytosol	16.86	41.2
AT4G20210.1	Thale cress	plastid	39.44	40.17
PGSC0003DMT400075074	Potato	cytosol	13.58	39.9
AT3G14520.1	Thale cress	plastid	39.44	39.83
AT3G14490.1	Thale cress	plastid	38.95	39.6
VIT_18s0001g04200.t01	Wine grape	cytosol	7.69	39.5
AT3G14540.1	Thale cress	plastid	38.63	39.2
AT1G31950.3	Thale cress	cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole	37.64	37.83
PGSC0003DMT400070310	Potato	cytosol	18.99	37.3
AT3G32030.1	Thale cress	plastid	36.66	37.09
PGSC0003DMT400079785	Potato	cytosol	18.66	36.66
AT1G33750.1	Thale cress	mitochondrion, plastid	36.17	36.65
AT3G29410.1	Thale cress	plastid	36.17	36.65
Solyc01g101190.2.1	Tomato	cytosol	30.61	33.88
Solyc01g101220.1.1	Tomato	cytosol	9.17	33.33
PGSC0003DMT400047124	Potato	cytosol	16.2	31.83
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.73	29.03
Os02t0458100-01	Rice	plastid	18.33	28.64
VIT_18s0001g04510.t01	Wine grape	plastid	13.91	27.78
AT4G16740.1	Thale cress	mitochondrion	25.37	27.43
AT3G25810.1	Thale cress	plastid	26.84	27.42
AT2G24210.1	Thale cress	plastid	25.53	26.4
AT4G16730.1	Thale cress	cytosol	23.24	26.35
AT3G25830.1	Thale cress	plastid	25.7	26.17
AT3G25820.1	Thale cress	plastid	25.7	26.17
KRG93110	Soybean	mitochondrion	12.11	25.0
GSMUA_Achr6P24340_001	Banana	cytosol	5.73	23.49
GSMUA_Achr6P24330_001	Banana	cytosol	5.4	23.4
AT1G61680.1	Thale cress	plastid	21.11	22.67
VIT_18s0001g05430.t01	Wine grape	cytosol	16.53	20.95

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:843344	MapMan:9.1.4.2	ProteinID:AAB61105.1	ProteinID:AEE35014.1
EMBL:AF497486	ArrayExpress:AT1G70080	EnsemblPlantsGene:AT1G70080	RefSeq:AT1G70080	TAIR:AT1G70080	RefSeq:AT1G70080-TAIR-G
EnsemblPlants:AT1G70080.1	TAIR:AT1G70080.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006629	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0010333	GO:GO:0016114	GO:GO:0016829
GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965	InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_177165.1	PFAM:PF01397
PFAM:PF03936	PO:PO:0009005	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	UniProt:Q84UU9	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI000004843D	:	:	:	:	:

Description

TPS06Terpenoid synthase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q84UU9]

Coordinates

chr1:-:26394492..26397603

Molecular Weight (calculated)

71115.4 Da

IEP (calculated)

5.843

GRAVY (calculated)

-0.194

Length

611 amino acids

Sequence
(BLAST)

001: MEAITKYGSY FNVRFLSRLC WRLNLSSSYH YPLLKSSLSF SRFQSPKKLC LVRATTNPTD DNSTTRSFTP HPPSLWGHHF LSASVNQTEM DDLWRQIEAL
101: KPIVNAMLLP CNGADAKKIT CFIHTLVSLG VSYHFEEKIV EFLKDAFENI EDMIIDCKED DLYTVSIIFR VFRLYGHYIT PDIFNRFKGD DGNFKKCLND
201: DVRGMLSFYE ASHFGTTTED ILEEAMSFTQ KHLELFLVGE KAKHYPHITK LIQAALYIPQ NFNLEILVAR EYIDFYELET DHNEMLLKLA KLNFRFLQLQ
301: YIQDLKTLTT WWKELDLVSK IPVYFRERLA EPYFWATGIY YEPQYSAARI MLAKSIILVD IVDNTFDVYG TIDEVKSLVQ AIERWDSDAV DVLPDYLKVV
401: FRTTFDLFKE LEEYVSSEAR SFTMQYAYEQ LRILMKGYLQ EAEWSNRGHL PSHEEYIEVG VASTAGEVLL AMTFIPMGDA AGVGVYEWLR SRPKLTHALF
501: VKSRLRDDIA TYKEEMKRGD VCNGINCYTK QHKVSEEEAC IEFEKKTNHM SKVMNEEFLK AAKFIPLHIL RPVLNYGRLA DVCYKYGDGY TFAGEKIKDY
601: ITSLYVDLIT L

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.