Factsheet for AT1G31950.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, mitochondrion, plastid, cytosol

Predictor Summary:

plastid 4
cytosol 1
mitochondrion 2
vacuole 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G14520.1	Thale cress	plastid	80.43	80.83
AT3G14540.1	Thale cress	plastid	79.44	80.23
CDY67821	Canola	cytosol	22.86	71.65
CDY27296	Canola	cytosol	21.71	67.69
AT3G14490.1	Thale cress	plastid	58.72	59.4
AT3G32030.1	Thale cress	plastid	54.44	54.8
AT3G29410.1	Thale cress	plastid	52.96	53.4
AT1G33750.1	Thale cress	mitochondrion, plastid	52.3	52.74
VIT_18s0001g04200.t01	Wine grape	cytosol	8.72	44.54
AT5G48110.1	Thale cress	plastid	24.18	43.36
AT5G44630.1	Thale cress	cytosol	38.65	42.19
AT4G13300.1	Thale cress	cytosol	36.84	40.43
PGSC0003DMT400050941	Potato	cytosol	16.61	40.4
PGSC0003DMT400075074	Potato	cytosol	13.65	39.9
AT3G29110.1	Thale cress	plastid	38.98	39.83
AT4G13280.2	Thale cress	cytosol	35.2	38.63
AT1G70080.1	Thale cress	mitochondrion	37.83	37.64
AT1G66020.1	Thale cress	plastid	37.01	37.63
AT4G20210.1	Thale cress	plastid	36.68	37.17
AT4G20200.1	Thale cress	plastid	36.84	37.09
AT1G48820.1	Thale cress	mitochondrion, plastid	33.88	36.72
AT4G15870.1	Thale cress	plastid	35.69	36.29
AT3G29190.1	Thale cress	plastid	35.69	36.11
AT2G23230.2	Thale cress	plastid	36.18	36.01
AT1G48800.1	Thale cress	mitochondrion, plastid	35.53	35.82
AT4G20230.2	Thale cress	plastid	36.35	35.7
PGSC0003DMT400070310	Potato	cytosol	18.09	35.37
PGSC0003DMT400047124	Potato	cytosol	17.93	35.05
Solyc01g101190.2.1	Tomato	cytosol	31.58	34.78
PGSC0003DMT400079785	Potato	cytosol	17.76	34.73
Solyc01g101220.1.1	Tomato	cytosol	8.55	30.95
VIT_18s0001g04510.t01	Wine grape	plastid	14.8	29.41
Os02t0458100-01	Rice	plastid	18.42	28.64
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.98	27.42
AT4G16730.1	Thale cress	cytosol	23.52	26.53
AT2G24210.1	Thale cress	plastid	24.51	25.21
AT3G25810.1	Thale cress	plastid	23.52	23.91
AT4G16740.1	Thale cress	mitochondrion	22.04	23.72
AT3G25830.1	Thale cress	plastid	22.86	23.17
AT3G25820.1	Thale cress	plastid	22.86	23.17
GSMUA_Achr6P24330_001	Banana	cytosol	5.26	22.7
AT1G61680.1	Thale cress	plastid	21.05	22.5
KRG93110	Soybean	mitochondrion	10.53	21.62
GSMUA_Achr6P24340_001	Banana	cytosol	5.26	21.48
VIT_18s0001g05430.t01	Wine grape	cytosol	15.62	19.71

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	EntrezGene:840085	MapMan:9.1.4.2	UniProt:A0A1P8AMI7	ProteinID:ANM57870.1
ArrayExpress:AT1G31950	EnsemblPlantsGene:AT1G31950	RefSeq:AT1G31950	TAIR:AT1G31950	RefSeq:AT1G31950-TAIR-G	EnsemblPlants:AT1G31950.3
GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150	GO:GO:0008152
GO:GO:0010333	GO:GO:0016740	GO:GO:0016829	GO:GO:0046872	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	RefSeq:NP_001320348.1	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22
SUPFAM:SSF48239	SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd
InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI000009EAE1	SEG:seg	:	:	:

Description

Terpenoid cyclases/Protein prenyltransferases superfamily protein [Source:TAIR;Acc:AT1G31950]

Coordinates

chr1:+:11475623..11478548

Molecular Weight (calculated)

70426.9 Da

IEP (calculated)

6.477

GRAVY (calculated)

-0.234

Length

608 amino acids

Sequence
(BLAST)

001: MEAIRIGFGL PNVHSVPLCL TTTRCLFPRQ RLLHSHTPSW KPAKQQDFFV ASSSKKSSDD LESSLPTPHF SPSLWGDHFL SVSLNRAVEF DELEREIETT
101: KPLARDKLMS SESSDKEKIR LIHLLVSMGI SYHFDKEIQD ILKHSFTKLD DIIVGEDDLE TISIMFEVFK LYGHKMSCDA FDRFRGNDGR FKESLVRDFR
201: GMLQLFEVAH LGTPCEVIMD EALSFTRNHL ESLTSGNAST ASPHLLKHIQ NSLYIPRYCN IEVLVAREYI SYYEQEEGHD EILLKFAKLN FNFCQFHYVQ
301: ELKTLTKWWR DLDLASKLPY IRDRLVESHL VALGPYFEPH YSLGRIIVAK INMIMVVVDD TYDAYATLPQ VKALTECLQR WSIEVSDKLP DYLRIVLGSL
401: FDVMGEIERE MRPLGRLYRV KQVVEKIKII TKAYQEIAKW ARTGHVSTFD EYMKVGVLTA GMADYAAYCF IGMEDINEKE AFEWLNSNPL IIKHLTAMFR
501: LANDVGTYET EINRGEVANG LNCYMKQYGV TKEEASRELR KMYVYRKKVV VEEFMNSHDH VPRQVLLRCL NIARIFDVFY TEGDGYSEPK GKIEHFMTSL
601: YLHPIPLS

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.