Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028251.1-P | Field mustard | cytosol | 74.15 | 74.15 |
| CDX74453 | Canola | cytosol | 70.2 | 73.63 |
| Bra039519.1-P | Field mustard | cytosol | 71.1 | 71.1 |
| CDY14933 | Canola | cytosol | 61.94 | 70.7 |
| AT4G13300.1 | Thale cress | cytosol | 56.37 | 56.68 |
| AT4G13280.2 | Thale cress | cytosol | 54.58 | 54.87 |
| AT4G15870.1 | Thale cress | plastid | 48.83 | 45.48 |
| AT3G29110.1 | Thale cress | plastid | 48.47 | 45.38 |
| AT4G20210.1 | Thale cress | plastid | 48.65 | 45.17 |
| AT3G29190.1 | Thale cress | plastid | 47.94 | 44.43 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 9.34 | 43.7 |
| AT1G48820.1 | Thale cress | mitochondrion, plastid | 43.99 | 43.67 |
| AT4G20200.1 | Thale cress | plastid | 47.22 | 43.54 |
| AT1G66020.1 | Thale cress | plastid | 46.68 | 43.48 |
| AT1G48800.1 | Thale cress | mitochondrion, plastid | 46.86 | 43.28 |
| AT4G20230.2 | Thale cress | plastid | 47.94 | 43.13 |
| AT1G70080.1 | Thale cress | mitochondrion | 47.04 | 42.88 |
| AT2G23230.2 | Thale cress | plastid | 45.96 | 41.9 |
| AT3G14490.1 | Thale cress | plastid | 42.55 | 39.43 |
| AT5G48110.1 | Thale cress | plastid | 23.88 | 39.23 |
| AT3G14540.1 | Thale cress | plastid | 42.19 | 39.04 |
| AT1G31950.3 | Thale cress | cytosol, endoplasmic reticulum, mitochondrion, plastid, vacuole | 42.19 | 38.65 |
| AT3G14520.1 | Thale cress | plastid | 41.83 | 38.51 |
| PGSC0003DMT400050941 | Potato | cytosol | 17.06 | 38.0 |
| PGSC0003DMT400075074 | Potato | cytosol | 14.18 | 37.98 |
| AT1G33750.1 | Thale cress | mitochondrion, plastid | 40.4 | 37.31 |
| AT3G29410.1 | Thale cress | plastid | 40.4 | 37.31 |
| AT3G32030.1 | Thale cress | plastid | 40.4 | 37.25 |
| Solyc01g101190.2.1 | Tomato | cytosol | 33.57 | 33.88 |
| PGSC0003DMT400047124 | Potato | cytosol | 18.31 | 32.8 |
| PGSC0003DMT400070310 | Potato | cytosol | 17.95 | 32.15 |
| PGSC0003DMT400079785 | Potato | cytosol | 17.41 | 31.19 |
| Solyc01g101220.1.1 | Tomato | cytosol | 9.16 | 30.36 |
| Os02t0458100-01 | Rice | plastid | 19.75 | 28.13 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 15.44 | 27.74 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 14.72 | 26.8 |
| AT4G16730.1 | Thale cress | cytosol | 24.24 | 25.05 |
| KRG93110 | Soybean | mitochondrion | 13.11 | 24.66 |
| AT4G16740.1 | Thale cress | mitochondrion | 24.42 | 24.07 |
| AT3G25810.1 | Thale cress | plastid | 24.78 | 23.08 |
| AT3G25830.1 | Thale cress | plastid | 24.42 | 22.67 |
| AT3G25820.1 | Thale cress | plastid | 24.42 | 22.67 |
| AT2G24210.1 | Thale cress | plastid | 23.34 | 22.0 |
| AT1G61680.1 | Thale cress | plastid | 22.26 | 21.79 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 5.39 | 20.13 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 16.7 | 19.29 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 4.85 | 19.15 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | EntrezGene:834491 | MapMan:9.1.4.2 | ProteinID:AED95140.1 | ArrayExpress:AT5G44630 |
| EnsemblPlantsGene:AT5G44630 | RefSeq:AT5G44630 | TAIR:AT5G44630 | RefSeq:AT5G44630-TAIR-G | EnsemblPlants:AT5G44630.1 | TAIR:AT5G44630.1 |
| EMBL:AY876386 | ProteinID:BAA98116.1 | EMBL:BT030324 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006629 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009506 | GO:GO:0009987 |
| GO:GO:0010333 | GO:GO:0016106 | GO:GO:0016114 | GO:GO:0016829 | GO:GO:0046872 | GO:GO:0051762 |
| GO:GO:0102878 | GO:GO:0102879 | GO:GO:0102883 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf |
| RefSeq:NP_199276.1 | PFAM:PF01397 | PFAM:PF03936 | PO:PO:0000037 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0009056 | PO:PO:0009062 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF22 |
| UniProt:Q4KSH9 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf |
| InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0000162819 | SEG:seg | : | : |
Description
BSAlpha-barbatene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q4KSH9]
Coordinates
chr5:+:18002996..18005849
Molecular Weight (calculated)
64912.8 Da
IEP (calculated)
5.071
GRAVY (calculated)
-0.315
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.