CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14934	Canola	cytosol	3.01	100.0
Bra028251.1-P	Field mustard	cytosol	99.06	94.43
CDY14933	Canola	cytosol	83.8	91.19
AT5G44630.1	Thale cress	cytosol	73.63	70.2
CDY71184	Canola	cytosol	42.56	67.66
CDY63249	Canola	cytosol	67.98	64.93
CDY18347	Canola	cytosol	19.02	60.84
CDY70719	Canola	cytosol	33.52	51.15
CDY68962	Canola	cytosol	46.89	49.4
CDY69236	Canola	cytosol	44.07	48.35
CDX98661	Canola	cytosol	49.34	47.04
CDY67821	Canola	cytosol	15.82	43.3
CDX95273	Canola	plastid	33.9	42.96
CDY27296	Canola	cytosol	15.44	42.05
CDY42473	Canola	cytosol	44.44	41.99
VIT_18s0001g04200.t01	Wine grape	cytosol	9.23	41.18
CDY23121	Canola	cytosol	29.38	41.05
CDY01639	Canola	cytosol	14.88	40.93
CDY41707	Canola	plastid	44.82	40.89
CDY49723	Canola	plastid	45.76	40.77
PGSC0003DMT400050941	Potato	cytosol	19.02	40.4
CDX76471	Canola	plastid	45.57	40.13
CDY09325	Canola	plastid	20.34	40.0
CDY09324	Canola	plastid	45.01	39.9
CDY13053	Canola	extracellular	41.43	39.78
CDY54565	Canola	plastid	42.56	39.3
CDX98659	Canola	plastid	45.39	39.0
CDX76457	Canola	plastid	42.75	37.77
CDX82478	Canola	cytosol	37.85	37.43
CDY39124	Canola	cytoskeleton, cytosol, plastid	38.61	36.67
CDX82477	Canola	plastid	20.72	36.67
CDX95274	Canola	cytosol	9.04	36.09
CDX75776	Canola	plastid	39.55	35.78
CDX98470	Canola	plastid	39.17	35.62
PGSC0003DMT400075074	Potato	cytosol	13.94	35.58
CDY39119	Canola	plastid	40.11	35.38
CDY06577	Canola	cytosol	21.85	35.37
CDX82475	Canola	plastid	38.42	35.11
CDX87217	Canola	plastid	36.53	32.28
CDY32356	Canola	plastid	37.66	32.26
Solyc01g101190.2.1	Tomato	cytosol	33.52	32.25
CDY02143	Canola	plastid	33.33	32.01
PGSC0003DMT400070310	Potato	cytosol	17.89	30.55
PGSC0003DMT400047124	Potato	cytosol	17.7	30.23
PGSC0003DMT400079785	Potato	cytosol	17.51	29.9
Solyc01g101220.1.1	Tomato	cytosol	9.23	29.17
CDY15827	Canola	cytosol	8.29	28.39
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	16.01	27.42
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	19.59	27.3
CDX75775	Canola	plastid	24.67	27.07
Os02t0458100-01	Rice	plastid	19.4	26.34
CDY68676	Canola	cytosol	18.08	25.53
VIT_18s0001g04510.t01	Wine grape	plastid	14.5	25.16
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	11.86	25.1
KRG93110	Soybean	mitochondrion	12.62	22.64
CDY21487	Canola	plastid	24.48	21.85
CDX76827	Canola	plastid	22.6	21.47
CDX90785	Canola	plastid	23.92	21.42
CDX83208	Canola	plastid	23.73	21.18
CDY62515	Canola	cytosol	15.82	20.95
CDY54750	Canola	cytosol	15.44	20.45
CDY66920	Canola	cytosol	12.62	20.24
CDX83558	Canola	plastid	22.41	20.2
CDX83560	Canola	plastid	21.47	20.18
CDY68788	Canola	endoplasmic reticulum, golgi	15.82	20.0
CDY13587	Canola	plastid	22.03	19.86
CDY13589	Canola	plastid	20.15	19.21
VIT_18s0001g05430.t01	Wine grape	cytosol	17.33	19.09
CDY53648	Canola	cytosol	9.04	18.75
CDY53129	Canola	cytosol	9.04	18.75
CDY12909	Canola	cytosol	7.91	18.1
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	22.98	17.86
GSMUA_Achr6P24330_001	Banana	cytosol	4.71	17.73
CDY61957	Canola	plastid	12.43	17.46
GSMUA_Achr6P24340_001	Banana	cytosol	4.9	17.45
CDY12910	Canola	plastid	4.14	14.77

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078CHI9	EnsemblPlants:CDX74453	ProteinID:CDX74453
ProteinID:CDX74453.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00114323001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase	UniParc:UPI0004EE7D4A
SEG:seg	:	:	:	:	:

Description

BnaA04g09360D

Coordinates

chrLK031801:-:396568..402106

Molecular Weight (calculated)

62520.4 Da

IEP (calculated)

5.698

GRAVY (calculated)

-0.239

Length

531 amino acids

Sequence
(BLAST)

001: MEAKRKVDHE IGFDFTKLPS SKWGDHFLTV TVTDSDIDAL ANEIEVLKLK VRDMLIWYSG DDGEATKRKI LIIHFLVSLG LAYHFENEIE HIVKIAFEKI
101: ADLIADENDL YTISIMFRVF RTYGHNMSSD VFKRFKEDDE KFKRYLINDF KGMLSFYEAL HLGTTTDYIL DEALSFTLSH LETIATGHLA SPGHISRLIQ
201: KALHIPQHMN IEALVAREYI SFYEQEENHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWR GLDHTSKLPP NFRERTVETW LAALMMYFEP QFSLGRIMSA
301: KFYLAITFLD DACDTYASID EVRNLVDCIE RWDPDYMGEL QGHMKTAFKF VMCVYKEYED ILRSQGRLFV LEEMIEEFKI LVRTNLQLVK WAREDCMPSF
401: DDKKIDFEWL RSRPKVVQVL AAKTRLMDDI TDYEEDIGKG YTANALNYYI KQHGVTREEA IKVFDKMIKY INKIVNEECL KTTHISRRVL NQIINYGRSL
501: DVLYTSDDVF NHREGMLKEY ITTLLVDPIH L

Best Arabidopsis Sequence Match ( AT5G44630.1 )
(BLAST)

001: MEALGNFDYE SYTNFTKLPS SQWGDQFLKF SIADSDFDVL EREIEVLKPK VRENIFVSSS TDKDAMKKTI LSIHFLDSLG LSYHFEKEIE ESLKHAFEKI
101: EDLIADENKL HTISTIFRVF RTYGYYMSSD VFKIFKGDDG KFKESLIEDV KGMLSFYEAV HFGTTTDHIL DEALSFTLNH LESLATGRRA SPPHISKLIQ
201: NALHIPQHRN IQALVAREYI SFYEHEEDHD ETLLKLAKLN FKFLQLHYFQ ELKTITMWWT KLDHTSNLPP NFRERTVETW FAALMMYFEP QFSLGRIMSA
301: KLYLVITFLD DACDTYGSIS EVESLADCLE RWDPDYMENL QGHMKTAFKF VMYLFKEYEE ILRSQGRSFV LEKMIEEFKI IARKNLELVK WARGGHVPSF
401: DEYIESGGAE IGTYATIACS IMGLGEIGKK EAFEWLISRP KLVRILGAKT RLMDDIADFE EDMEKGYTAN ALNYYMNEHG VTKEEASREL EKMNGDMNKI
501: VNEECLKITT MPRRILMQSV NYARSLDVLY TADDVYNHRE GKLKEYMRLL LVDPILL

Arabidopsis Description

BSAlpha-barbatene synthase [Source:UniProtKB/Swiss-Prot;Acc:Q4KSH9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.