Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90785 | Canola | plastid | 76.19 | 53.96 |
| CDY15827 | Canola | cytosol | 19.76 | 53.55 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 31.43 | 52.59 |
| PGSC0003DMT400055897 | Potato | cytosol | 14.29 | 49.59 |
| CDX83208 | Canola | plastid | 63.57 | 44.87 |
| CDY21487 | Canola | plastid | 63.1 | 44.54 |
| CDY68676 | Canola | cytosol | 37.14 | 41.49 |
| AT2G24210.1 | Thale cress | plastid | 57.62 | 40.95 |
| CDX76827 | Canola | plastid | 43.81 | 32.92 |
| CDY13587 | Canola | plastid | 44.29 | 31.58 |
| CDX83558 | Canola | plastid | 44.05 | 31.41 |
| CDY13589 | Canola | plastid | 41.19 | 31.06 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 31.9 | 30.45 |
| CDX83560 | Canola | plastid | 40.71 | 30.27 |
| PGSC0003DMT400089009 | Potato | cytosol | 11.19 | 29.19 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 47.14 | 28.99 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 10.71 | 28.48 |
| CDY18347 | Canola | cytosol | 11.19 | 28.31 |
| CDY12910 | Canola | plastid | 9.29 | 26.17 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 26.19 | 25.76 |
| Solyc02g079840.1.1 | Tomato | cytosol | 32.62 | 25.46 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 30.48 | 24.57 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 30.95 | 23.59 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 32.62 | 23.1 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 30.95 | 22.97 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 31.67 | 22.39 |
| CDY67821 | Canola | cytosol | 10.24 | 22.16 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 30.95 | 22.03 |
| CDX82477 | Canola | plastid | 15.71 | 22.0 |
| CDY09325 | Canola | plastid | 14.05 | 21.85 |
| CDY70719 | Canola | cytosol | 17.86 | 21.55 |
| CDY01639 | Canola | cytosol | 9.76 | 21.24 |
| CDX95273 | Canola | plastid | 20.71 | 20.76 |
| CDY27296 | Canola | cytosol | 9.29 | 20.0 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 18.57 | 19.75 |
| CDY61957 | Canola | plastid | 17.14 | 19.05 |
| CDY14934 | Canola | cytosol | 0.71 | 18.75 |
| CDY54750 | Canola | cytosol | 17.38 | 18.2 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 17.14 | 17.06 |
| CDY62515 | Canola | cytosol | 16.19 | 16.96 |
| CDY14933 | Canola | cytosol | 19.05 | 16.39 |
| CDX87217 | Canola | plastid | 23.33 | 16.31 |
| CDY68962 | Canola | cytosol | 19.29 | 16.07 |
| CDX74453 | Canola | cytosol | 20.0 | 15.82 |
| CDX98661 | Canola | cytosol | 20.95 | 15.8 |
| CDX75776 | Canola | plastid | 21.9 | 15.67 |
| CDY54565 | Canola | plastid | 21.19 | 15.48 |
| CDX76457 | Canola | plastid | 22.14 | 15.47 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 12.62 | 15.27 |
| CDX75775 | Canola | plastid | 17.38 | 15.08 |
| CDY13053 | Canola | extracellular | 19.76 | 15.01 |
| CDY69236 | Canola | cytosol | 16.9 | 14.67 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 19.52 | 14.67 |
| CDY49723 | Canola | plastid | 20.71 | 14.6 |
| CDX76471 | Canola | plastid | 20.95 | 14.59 |
| CDY63249 | Canola | cytosol | 19.29 | 14.57 |
| CDY41707 | Canola | plastid | 20.0 | 14.43 |
| CDX98659 | Canola | plastid | 21.19 | 14.4 |
| CDY39119 | Canola | plastid | 20.48 | 14.29 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 11.9 | 14.29 |
| CDY02143 | Canola | plastid | 18.81 | 14.29 |
| CDY09324 | Canola | plastid | 20.0 | 14.02 |
| CDX82478 | Canola | cytosol | 17.86 | 13.97 |
| CDX82475 | Canola | plastid | 19.29 | 13.94 |
| CDY66920 | Canola | cytosol | 10.95 | 13.9 |
| CDY32356 | Canola | plastid | 19.76 | 13.39 |
| CDY42473 | Canola | cytosol | 17.62 | 13.17 |
| CDX98470 | Canola | plastid | 18.1 | 13.01 |
| CDY06577 | Canola | cytosol | 7.14 | 9.15 |
| CDY12909 | Canola | cytosol | 5.0 | 9.05 |
| CDY23121 | Canola | cytosol | 7.86 | 8.68 |
| CDY71184 | Canola | cytosol | 6.19 | 7.78 |
| KRH22502 | Soybean | cytosol | 3.1 | 7.43 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 4.52 | 4.99 |
| CDY53648 | Canola | cytosol | 1.43 | 2.34 |
| CDY53129 | Canola | cytosol | 1.43 | 2.34 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 0.48 | 1.69 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 0.24 | 0.58 |
| CDX95274 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:A0A078JMS9 | UniProt:A0A078JMS9 | EnsemblPlants:CDY68788 |
| ProteinID:CDY68788 | ProteinID:CDY68788.1 | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00079838001 | InterPro:IPR008949 | InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 |
| PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | SUPFAM:SSF48239 | SUPFAM:SSF48576 | TMHMM:TMhelix |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0004EF1C12 | : |
Description
BnaCnng60530DBnaCnng60530D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JMS9]
Coordinates
chrLK037985:-:770..2708
Molecular Weight (calculated)
49786.0 Da
IEP (calculated)
8.503
GRAVY (calculated)
-0.342
Length
420 amino acids
Sequence
(BLAST)
(BLAST)
001: LYYSIHNKPN GNQTTISHYK FYKSIKRRVI QGKCVDMMMF NIFFFLCLTS ICYLYIYIHA NRYLLPSTFY IPTVIFSLMA SLLQMGLPLI YRNTLVKSIQ
101: RPRSFTCTIV AKTTRADESP VVLRRSANYQ PSLWDHHHLL SVENKYSKDE SVHDRDLLKE NVRTMLNDER TTHLEQLELI DDLQKLGVSY HFEREIDNIL
201: TFTYHKDRRN FMEYDMEYDL HATALEFRLL RQHGFNVPED VFDVFMENCG KFDSHDINGL LSLYEASYLS TKSDTKLQKN IRVFATQQLR NFVDTHGSKD
301: LSSCDVEMVV QALDMPYHWR MGRLATRWYI DMYGKKHNKN PMLLEFSKLD FSIVQAVYQE ELKYVSSWWR ETGLANQLHF SRDRIVENYF WTTGQIQEPQ
401: FGKVRASLTL RTKMGVLIIV
101: RPRSFTCTIV AKTTRADESP VVLRRSANYQ PSLWDHHHLL SVENKYSKDE SVHDRDLLKE NVRTMLNDER TTHLEQLELI DDLQKLGVSY HFEREIDNIL
201: TFTYHKDRRN FMEYDMEYDL HATALEFRLL RQHGFNVPED VFDVFMENCG KFDSHDINGL LSLYEASYLS TKSDTKLQKN IRVFATQQLR NFVDTHGSKD
301: LSSCDVEMVV QALDMPYHWR MGRLATRWYI DMYGKKHNKN PMLLEFSKLD FSIVQAVYQE ELKYVSSWWR ETGLANQLHF SRDRIVENYF WTTGQIQEPQ
401: FGKVRASLTL RTKMGVLIIV
001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D
Arabidopsis Description
TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.