Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY68676 | Canola | cytosol | 96.81 | 64.63 |
| CDY15827 | Canola | cytosol | 29.08 | 47.1 |
| PGSC0003DMT400055897 | Potato | cytosol | 19.52 | 40.5 |
| AT4G16740.1 | Thale cress | mitochondrion | 76.1 | 33.81 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 52.59 | 31.43 |
| CDY18347 | Canola | cytosol | 18.33 | 27.71 |
| PGSC0003DMT400089009 | Potato | cytosol | 17.13 | 26.71 |
| VIT_13s0067g03830.t01 | Wine grape | plastid | 40.64 | 23.18 |
| CDY13589 | Canola | plastid | 49.8 | 22.44 |
| CDX90785 | Canola | plastid | 52.59 | 22.26 |
| CDY13587 | Canola | plastid | 50.6 | 21.56 |
| CDX83558 | Canola | plastid | 50.6 | 21.56 |
| CDY67821 | Canola | cytosol | 16.33 | 21.13 |
| CDX83208 | Canola | plastid | 49.8 | 21.01 |
| CDY21487 | Canola | plastid | 49.0 | 20.67 |
| Solyc02g079840.1.1 | Tomato | cytosol | 43.43 | 20.26 |
| CDY12910 | Canola | plastid | 11.95 | 20.13 |
| VIT_13s0067g00130.t01 | Wine grape | plastid | 41.04 | 19.77 |
| VIT_00s0724g00010.t01 | Wine grape | cytosol | 33.07 | 19.44 |
| CDX76827 | Canola | plastid | 42.63 | 19.14 |
| CDY09325 | Canola | plastid | 20.32 | 18.89 |
| VIT_13s0067g03700.t01 | Wine grape | cytosol | 42.23 | 18.73 |
| CDX82477 | Canola | plastid | 22.31 | 18.67 |
| VIT_13s0084g00010.t01 | Wine grape | cytosol | 40.24 | 18.33 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 49.8 | 18.3 |
| CDX83560 | Canola | plastid | 40.64 | 18.05 |
| VIT_13s0067g00370.t01 | Wine grape | plastid | 41.43 | 17.63 |
| CDY01639 | Canola | cytosol | 13.15 | 17.1 |
| VIT_13s0067g03790.t01 | Wine grape | plastid | 40.24 | 17.03 |
| VIT_13s0019g00060.t01 | Wine grape | plastid | 40.24 | 17.0 |
| VIT_13s0067g00300.t01 | Wine grape | cytosol | 10.36 | 16.46 |
| CDY61957 | Canola | plastid | 22.31 | 14.81 |
| CDY70719 | Canola | cytosol | 20.32 | 14.66 |
| CDX95273 | Canola | plastid | 23.51 | 14.08 |
| VIT_00s2271g00010.t01 | Wine grape | cytosol | 20.72 | 13.16 |
| CDY14933 | Canola | cytosol | 25.5 | 13.11 |
| CDY27296 | Canola | cytosol | 9.96 | 12.82 |
| CDX74453 | Canola | cytosol | 25.1 | 11.86 |
| CDY68962 | Canola | cytosol | 22.71 | 11.31 |
| CDX75776 | Canola | plastid | 25.9 | 11.07 |
| CDX87217 | Canola | plastid | 26.29 | 10.98 |
| CDY54750 | Canola | cytosol | 17.53 | 10.97 |
| CDY63249 | Canola | cytosol | 24.3 | 10.97 |
| CDY42473 | Canola | cytosol | 24.3 | 10.85 |
| CDY62515 | Canola | cytosol | 17.13 | 10.72 |
| VIT_13s0067g03740.t01 | Wine grape | cytosol | 17.93 | 10.66 |
| CDY69236 | Canola | cytosol | 20.32 | 10.54 |
| CDY13053 | Canola | extracellular | 23.11 | 10.49 |
| CDX76457 | Canola | plastid | 25.1 | 10.48 |
| CDY54565 | Canola | plastid | 23.9 | 10.43 |
| CDX98661 | Canola | cytosol | 23.11 | 10.41 |
| CDY09324 | Canola | plastid | 24.7 | 10.35 |
| CDX75775 | Canola | plastid | 19.92 | 10.33 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 22.71 | 10.2 |
| CDX98659 | Canola | plastid | 24.7 | 10.03 |
| CDY41707 | Canola | plastid | 23.11 | 9.97 |
| CDX98470 | Canola | plastid | 23.11 | 9.93 |
| CDY39119 | Canola | plastid | 23.51 | 9.8 |
| CDX76471 | Canola | plastid | 23.51 | 9.78 |
| CDY49723 | Canola | plastid | 23.11 | 9.73 |
| CDX82478 | Canola | cytosol | 20.72 | 9.68 |
| CDX82475 | Canola | plastid | 21.51 | 9.29 |
| CDY32356 | Canola | plastid | 21.91 | 8.87 |
| CDY02143 | Canola | plastid | 19.52 | 8.86 |
| VIT_13s0067g03770.t01 | Wine grape | cytosol | 11.16 | 8.07 |
| VIT_13s0067g00090.t01 | Wine grape | cytosol | 10.76 | 7.71 |
| CDY06577 | Canola | cytosol | 8.37 | 6.4 |
| CDY14934 | Canola | cytosol | 0.4 | 6.25 |
| CDY12909 | Canola | cytosol | 5.58 | 6.03 |
| KRH22502 | Soybean | cytosol | 3.19 | 4.57 |
| CDY23121 | Canola | cytosol | 6.77 | 4.47 |
| CDY66920 | Canola | cytosol | 5.18 | 3.93 |
| CDY71184 | Canola | cytosol | 5.18 | 3.89 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 2.39 | 1.57 |
| CDX95274 | Canola | cytosol | 0.0 | 0.0 |
| GSMUA_Achr4P07690_001 | Banana | cytosol | 0.0 | 0.0 |
| VIT_13s0067g00320.t01 | Wine grape | cytosol | 0.0 | 0.0 |
| CDY53648 | Canola | cytosol | 0.0 | 0.0 |
| CDY53129 | Canola | cytosol | 0.0 | 0.0 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:50.4.2 | GO:A0A078K2Q8 | UniProt:A0A078K2Q8 | EnsemblPlants:CDY72187 |
| ProteinID:CDY72187 | ProteinID:CDY72187.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00025639001 | InterPro:IPR008949 | InterPro:IPR036965 |
| InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF16 | SUPFAM:SSF48239 | SUPFAM:SSF48576 |
| InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0004EF06F3 | SEG:seg | : |
Description
BnaAnng40250DBnaAnng40250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078K2Q8]
Coordinates
chrLK049477:+:294..1634
Molecular Weight (calculated)
30013.1 Da
IEP (calculated)
9.903
GRAVY (calculated)
-0.689
Length
251 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTQSQPLEA RRSANYRPSL WEHENLLLLG NKYAKEDKIE RAKLLKQEVS RMLDETEGLL EQLELVDNLQ RLGISYHFER EIKKILTNVH VRHVRHRKRV
101: DRKRSEDLYA TALKFRLLRQ HGFNIAQDVF GCFFGDGLDD EDIKSVLSLY EASYLSTRFD TKLKKTIYYT TTRLKKFVEM KNNESTSYVR KMVIRALEMP
201: YHRRVRRLEA RWYIDVYGET HDTNPNLLEL AKLDFNFVQV IHQDELKSLS R
101: DRKRSEDLYA TALKFRLLRQ HGFNIAQDVF GCFFGDGLDD EDIKSVLSLY EASYLSTRFD TKLKKTIYYT TTRLKKFVEM KNNESTSYVR KMVIRALEMP
201: YHRRVRRLEA RWYIDVYGET HDTNPNLLEL AKLDFNFVQV IHQDELKSLS R
001: MPKRQAQRRF TRKTDSKTPS QPLVSRRSAN YQPSLWQHEY LLSLGNTYVK EDNVERVTLL KQEVSKMLNE TEGLLEQLEL IDTLQRLGVS YHFEQEIKKT
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KLLLIPCKII SNYFTLYLFA YFFSESIYHA DGM
101: LTNVHVKNVR AHKNRIDRNR WGDLYATALE FRLLRQHGFS IAQDVFDGNI GVDLDDKDIK GILSLYEASY LSTRIDTKLK ESIYYTTKRL RKFVEVNKNE
201: TKSYTLRRMV IHALEMPYHR RVGRLEARWY IEVYGERHDM NPILLELAKL DFNFVQAIHQ DELKSLSSWW SKTGLTKHLD FVRDRITEGY FSSVGVMYEP
301: EFAYHRQMLT KVFMLITTID DIYDIYGTLE ELQLFTTIVE KLLLIPCKII SNYFTLYLFA YFFSESIYHA DGM
Arabidopsis Description
TPS03Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A4FVP2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.