CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX82477	Canola	plastid	48.76	78.67
Bra001555.1-P	Field mustard	plastid	77.07	61.35
CDX82478	Canola	cytosol	60.74	54.75
CDY67821	Canola	cytosol	17.36	43.3
AT3G32030.1	Thale cress	plastid	53.1	42.55
CDY27296	Canola	cytosol	16.32	40.51
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	30.99	39.37
CDY39119	Canola	plastid	47.93	38.54
CDY02143	Canola	plastid	43.8	38.34
CDY39124	Canola	cytoskeleton, cytosol, plastid	43.18	37.39
CDX82475	Canola	plastid	44.83	37.35
CDX98470	Canola	plastid	45.04	37.33
CDX87217	Canola	plastid	46.28	37.27
CDX75776	Canola	plastid	44.42	36.63
CDY32356	Canola	plastid	46.07	35.97
CDY18347	Canola	cytosol	11.57	33.73
CDY70719	Canola	cytosol	23.97	33.33
PGSC0003DMT400047124	Potato	cytosol	21.28	33.12
CDX95273	Canola	plastid	27.48	31.74
PGSC0003DMT400050941	Potato	cytosol	16.32	31.6
CDY06577	Canola	cytosol	20.45	30.18
Solyc01g101220.1.1	Tomato	cytosol	10.33	29.76
CDY09325	Canola	plastid	16.53	29.63
PGSC0003DMT400075074	Potato	cytosol	11.98	27.88
VIT_18s0001g04200.t01	Wine grape	cytosol	6.61	26.89
CDY14933	Canola	cytosol	26.03	25.82
CDX98661	Canola	cytosol	28.51	24.78
CDX74453	Canola	cytosol	27.07	24.67
CDY69236	Canola	cytosol	24.38	24.38
CDY68962	Canola	cytosol	25.21	24.21
CDY41707	Canola	plastid	28.72	23.88
Os02t0458100-01	Rice	plastid	18.8	23.27
CDY63249	Canola	cytosol	26.65	23.2
CDY54565	Canola	plastid	27.48	23.13
CDY49723	Canola	plastid	28.31	22.99
CDY01639	Canola	cytosol	9.09	22.8
CDX76457	Canola	plastid	28.1	22.63
VIT_18s0001g04510.t01	Wine grape	plastid	14.26	22.55
CDY42473	Canola	cytosol	25.62	22.06
CDX98659	Canola	plastid	27.89	21.84
CDX76471	Canola	plastid	26.86	21.56
CDY68676	Canola	cytosol	16.74	21.54
Solyc01g101190.2.1	Tomato	cytosol	24.38	21.38
CDY13053	Canola	extracellular	24.38	21.34
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	13.64	21.29
CDY15827	Canola	cytosol	6.82	21.29
CDY09324	Canola	plastid	25.83	20.87
CDY12910	Canola	plastid	6.4	20.81
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.33	19.92
KRG93110	Soybean	mitochondrion	11.57	18.92
PGSC0003DMT400079785	Potato	cytosol	11.98	18.65
PGSC0003DMT400070310	Potato	cytosol	11.78	18.33
CDY71184	Canola	cytosol	12.6	18.26
CDY68788	Canola	endoplasmic reticulum, golgi	15.08	17.38
CDY61957	Canola	plastid	13.43	17.2
CDY23121	Canola	cytosol	12.6	16.05
VIT_18s0001g05430.t01	Wine grape	cytosol	15.29	15.35
CDY21487	Canola	plastid	18.8	15.29
CDX90785	Canola	plastid	18.59	15.18
CDX83208	Canola	plastid	18.59	15.13
CDX76827	Canola	plastid	17.36	15.03
CDX83560	Canola	plastid	17.36	14.87
CDY13587	Canola	plastid	17.98	14.77
CDX83558	Canola	plastid	17.98	14.77
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	19.42	13.76
CDY62515	Canola	cytosol	11.16	13.47
CDY54750	Canola	cytosol	11.16	13.47
CDY13589	Canola	plastid	15.5	13.46
CDY66920	Canola	cytosol	8.88	12.99
CDY12909	Canola	cytosol	6.2	12.93
CDY14934	Canola	cytosol	0.41	12.5
CDY53648	Canola	cytosol	3.72	7.03
CDY53129	Canola	cytosol	3.72	7.03
CDX95274	Canola	cytosol	0.62	2.26
GSMUA_Achr6P24330_001	Banana	cytosol	0.21	0.71
GSMUA_Achr6P24340_001	Banana	cytosol	0.21	0.67

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078CFY0	EnsemblPlants:CDX75775	ProteinID:CDX75775
ProteinID:CDX75775.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00123720001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	TMHMM:TMhelix	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EEEEE2	SEG:seg	:	:	:	:

Description

BnaC03g38580D

Coordinates

chrLK031805:-:560909..568616

Molecular Weight (calculated)

56355.5 Da

IEP (calculated)

7.694

GRAVY (calculated)

-0.036

Length

484 amino acids

Sequence
(BLAST)

001: MEASRMSFGL SSPHHACKVP ICLKTNLSLV PQCLLQKKSF FRRQKKHLFC VRATKSASDD DLESSRPLTQ FSPSFWGDYF LSFSVDQSES DGLAKEIESV
101: MKLNVRDRLM SSHSGDKEKI RIIHLLICLG ISHYFDKEIE EILDQGFRKL NDIIAKEDDL ETISIMFEVF RLYGHKMPCD NFERFKGEDG RFKDSFWCCV
201: KSSVALFFRK VMGDKSIFDQ GFVTYCLGFA KLVYRLAMAH LILCLFSSLK VMLTSYNYFV YVTMFYLFLF GFTHNIFLQL LFYGTSVTYH VLGRCHNMEI
301: LAAREYVSFY DHEEGHDEVL LRFAKLSFNY CRLIYIQEIK TLTKWWNNLD VPSKLPYVRD RIVETHFPAL GPYFEPRYSL GRIIMTKIII VVVILDDTCD
401: AYGTFPEVKS LIDFLQRWDL GAIEELQGYL RIVAQTLLET LGEIEREMKP RGRSASVQHT IDELRGYSFV AKKQPWLNVA SNHV

Best Arabidopsis Sequence Match ( AT3G14490.1 )
(BLAST)

001: MEATRTSFGL HNAPLCPTTN PSLFPRRWLH KHTLSLKPAK QHHLVCVRAT ESNDNLESSR PLAHFSPTLW GDHFLSVPLH VAEFDDFSRE IEVTMKPKVR
101: DMLKSSKNSD NERIRLIHLL MNLGIAYHFE IEIDEILGQA FGNLDDIIAK ENDLETISTM FEVFRLRGYY MPCYAFNRFK GEDGRFKESL AEDIRGMLQL
201: YEAAHLGTPS EDIMDEALSF TRYRLESLTS NHTATASPHL SKHIQNALYR ARYHNLEILV AREYISFYEQ EEDHDETLLK FAKLNFNYCQ LHYIQELKDL
301: TKWWKELDLA SKLPYIRDRI VEVYFGALAL YFEPRYSLGR IIVTKITMIV TVFNDTCDAY GTLPEVTSLV DSFQRWDLGD IEKLPSYVKI VFRGVFETLE
401: EIEQEMRPQG RSRIVQVAVD EIKKLGKAYL AISKWARASH VPTFEEYMEF GMQTSMDHFA AYSFIAMEDC DENQTCEWYK SRPKMMEALN GVFRIKNDIN
501: TFEQEMSRGE VAKGLNCYMK QHGVSKEEAI GEMNKIYSNY YKIIMEEYLT TTAVPRPILV RCLNVSRPIH HFYKERDEFT DPYFGMLKEV ITSLFIHPIP
601: L

Arabidopsis Description

TPS17Terpenoid synthase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR2]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.