CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra001555.1-P	Field mustard	plastid	97.77	86.35
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	58.47	82.41
CDX82477	Canola	plastid	43.02	77.0
AT3G32030.1	Thale cress	plastid	69.65	61.92
CDX75775	Canola	plastid	54.75	60.74
CDY06577	Canola	cytosol	36.31	59.45
CDY39124	Canola	cytoskeleton, cytosol, plastid	58.66	56.35
CDY67821	Canola	cytosol	20.11	55.67
CDX75776	Canola	plastid	58.85	53.83
CDX98470	Canola	plastid	57.73	53.08
CDX82475	Canola	plastid	57.17	52.84
CDY39119	Canola	plastid	59.03	52.66
CDX87217	Canola	plastid	58.29	52.08
CDY02143	Canola	plastid	52.89	51.36
CDY32356	Canola	plastid	58.29	50.48
CDY14934	Canola	cytosol	1.49	50.0
CDY27296	Canola	cytosol	17.88	49.23
CDY18347	Canola	cytosol	14.71	47.59
VIT_18s0001g04200.t01	Wine grape	cytosol	9.68	43.7
CDY68962	Canola	cytosol	38.36	40.87
CDY70719	Canola	cytosol	26.26	40.52
PGSC0003DMT400050941	Potato	cytosol	18.81	40.4
PGSC0003DMT400075074	Potato	cytosol	15.64	40.38
CDY69236	Canola	cytosol	35.94	39.88
CDX98661	Canola	cytosol	40.6	39.14
CDX95274	Canola	cytosol	9.68	39.1
CDX74453	Canola	cytosol	37.43	37.85
CDY63249	Canola	cytosol	38.92	37.59
PGSC0003DMT400070310	Potato	cytosol	21.6	37.3
CDY14933	Canola	cytosol	33.71	37.09
PGSC0003DMT400079785	Potato	cytosol	21.23	36.66
CDY71184	Canola	cytosol	22.72	36.53
CDY23121	Canola	cytosol	25.33	35.79
CDY41707	Canola	plastid	38.36	35.4
CDX76457	Canola	plastid	39.29	35.11
CDY49723	Canola	plastid	38.73	34.9
CDX76471	Canola	plastid	38.36	34.16
CDY09324	Canola	plastid	37.8	33.89
CDX98659	Canola	plastid	38.92	33.82
Solyc01g101190.2.1	Tomato	cytosol	34.26	33.33
CDY42473	Canola	cytosol	34.45	32.92
Solyc01g101220.1.1	Tomato	cytosol	10.24	32.74
CDY13053	Canola	extracellular	33.71	32.73
CDY54565	Canola	plastid	34.82	32.52
CDX95273	Canola	plastid	25.33	32.46
PGSC0003DMT400047124	Potato	cytosol	18.62	32.15
CDY01639	Canola	cytosol	11.55	32.12
CDY09325	Canola	plastid	15.27	30.37
Os02t0458100-01	Rice	plastid	19.37	26.6
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	15.27	26.45
CDY66920	Canola	cytosol	16.01	25.98
CDY62515	Canola	cytosol	18.99	25.44
CDY54750	Canola	cytosol	18.62	24.94
VIT_18s0001g04510.t01	Wine grape	plastid	14.15	24.84
GSMUA_Achr6P24330_001	Banana	cytosol	6.33	24.11
CDY15827	Canola	cytosol	6.89	23.87
GSMUA_Achr6P24340_001	Banana	cytosol	6.52	23.49
KRG93110	Soybean	mitochondrion	12.66	22.97
CDX90785	Canola	plastid	25.33	22.93
CDX76827	Canola	plastid	23.84	22.9
CDY68676	Canola	cytosol	15.83	22.61
CDY21487	Canola	plastid	24.58	22.18
CDY13587	Canola	plastid	24.21	22.07
CDX83558	Canola	plastid	24.02	21.9
CDX83208	Canola	plastid	24.21	21.85
CDX83560	Canola	plastid	22.72	21.59
CDY53129	Canola	cytosol	10.06	21.09
CDY53648	Canola	cytosol	10.06	21.09
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	9.68	20.72
CDY12909	Canola	cytosol	8.94	20.69
CDY13589	Canola	plastid	20.11	19.39
VIT_18s0001g05430.t01	Wine grape	cytosol	17.13	19.09
CDY61957	Canola	plastid	13.41	19.05
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	24.02	18.89
CDY68788	Canola	endoplasmic reticulum, golgi	13.97	17.86
CDY12910	Canola	plastid	4.1	14.77

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078D5D2	EnsemblPlants:CDX82478	ProteinID:CDX82478
ProteinID:CDX82478.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00137619001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF25	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EEBD1B	SEG:seg	:	:	:	:

Description

BnaA03g33430D

Coordinates

chrLK031828:+:1475376..1479519

Molecular Weight (calculated)

62592.6 Da

IEP (calculated)

5.541

GRAVY (calculated)

-0.253

Length

537 amino acids

Sequence
(BLAST)

001: MIIVNKNFKR SFFAFLESDG LAKEIESVMK PNVRDRLMSS HSGDKEKIRI IHLLICLGIS HYFDKEIEEI LDQGFRKLND IIAKEDDLET ISIMFEVFRL
101: YGHKMSCDNF ERFKGEDGRF KESLAGDVRG MLQLYQAAHL GTPSEDILEE AMSFTRNQLE CFASQEMSTL SPHLSTHIRN ALYRPRCHNM EIFAAREYVS
201: FYNHEEGHDE VLLRFAKLSF NYCRLLYIQE IKTLTKWWNN LDVPSKLPYV RDRIVETHFP ALGPYFEPRY SLGRIIMTKI IIVVVILDDT CDAYGTFPEV
301: KSLIDFLQRW DLGAIEELQG YLRIVARTLL ETLGEIEREM KPRGRSASVQ HTIDEIKSIG RAYLAISNWA RAGHVPTFEE YMEVAMVTAG AGMDDFASYS
401: FIAMEDCDEK PLYEWFNSKP RIFQALCVMY RLKNDIATYE LEMKRGEVAN GVNCYMKQHD VTKEETVEEF NKIYRENYKI MMEEFLTTKC VPRQILMRCL
501: NISRTFDVIC KEGDGYTEPL GNLKDMITSF FLHPIPL

Best Arabidopsis Sequence Match ( AT3G32030.1 )
(BLAST)

001: MAVARTVFGL GTLSYLHQAP LFLKTSQSLF PRPSLSLKPM KHDFVCVKAT TKSSTSDDLE SGRPSILFSP SIWGDYFLSV SVDDSEFDDI AREIESVMKP
101: YVRDRLISSH NSNKDKIRLI HLLISLGISY YFESEIEMIL NKAFEELDMI IAEEDDLETI SIMFEVFRLY QHKMSCDSFV RFKGEDGRLK ESLVGDVRGM
201: LQLYQAAHLG TPSDQYIMEE AKSFTRNHLE SLVESTTIPP HFSSHIRDAL YIDRYHNMEI LVARKYISFY EQEEGHDLTL LKFGKLSFNY CRLHYIQELK
301: TLTKWWKDQD IPSNLPCVRD RIVETYFPTL GLYFEPRFSL GRIIIAKMTI IVVALNDVCD SYATYPEAKS LIDSLQRWDI EAIDELPNYS RIVLRLILET
401: IGEIEREMKP RGRSASVQHT IDETKSLGRA YLALSKWASE GYMPTFDEYM EVGEVTGGMD DFALYSFIAM EDCDEKPLYE WFDSKPKILQ ALSVLYRINN
501: DIVTYEREMS KGEVVNGVNS YMNQHGVTKE EAVEELRKMA RDNYKIVMEE LLTITDVPRP VLVRCLNLAR LFDVFCKHGN DEFTYPHGNL KDLITSIFIH
601: PIPV

Arabidopsis Description

TPS30Terpenoid synthase 30 [Source:UniProtKB/Swiss-Prot;Acc:Q9LH31]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.