Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX82475 | Canola | plastid | 89.95 | 90.88 |
| AT3G14490.1 | Thale cress | plastid | 78.19 | 76.37 |
| CDX82478 | Canola | cytosol | 53.83 | 58.85 |
| CDX82477 | Canola | plastid | 29.81 | 58.33 |
| CDY67821 | Canola | cytosol | 18.4 | 55.67 |
| CDY39119 | Canola | plastid | 56.56 | 55.15 |
| CDY27296 | Canola | cytosol | 18.23 | 54.87 |
| CDY39124 | Canola | cytoskeleton, cytosol, plastid | 51.79 | 54.38 |
| CDY32356 | Canola | plastid | 56.39 | 53.39 |
| CDX98470 | Canola | plastid | 52.98 | 53.25 |
| CDX87217 | Canola | plastid | 54.0 | 52.75 |
| CDY18347 | Canola | cytosol | 14.82 | 52.41 |
| CDY06577 | Canola | cytosol | 29.13 | 52.13 |
| CDY02143 | Canola | plastid | 49.06 | 52.08 |
| CDY14934 | Canola | cytosol | 1.36 | 50.0 |
| CDX75774 | Canola | cytosol, golgi, mitochondrion, plasma membrane | 31.69 | 48.82 |
| CDX75775 | Canola | plastid | 36.63 | 44.42 |
| VIT_18s0001g04200.t01 | Wine grape | cytosol | 8.86 | 43.7 |
| PGSC0003DMT400050941 | Potato | cytosol | 18.06 | 42.4 |
| PGSC0003DMT400075074 | Potato | cytosol | 14.82 | 41.83 |
| CDY70719 | Canola | cytosol | 24.7 | 41.67 |
| CDY68962 | Canola | cytosol | 35.43 | 41.27 |
| CDY69236 | Canola | cytosol | 32.88 | 39.88 |
| CDX98661 | Canola | cytosol | 37.82 | 39.86 |
| CDX74453 | Canola | cytosol | 35.78 | 39.55 |
| CDY14933 | Canola | cytosol | 32.54 | 39.14 |
| CDY63249 | Canola | cytosol | 36.63 | 38.67 |
| CDY71184 | Canola | cytosol | 21.12 | 37.13 |
| CDX95273 | Canola | plastid | 26.24 | 36.75 |
| CDY41707 | Canola | plastid | 36.12 | 36.43 |
| PGSC0003DMT400047124 | Potato | cytosol | 19.25 | 36.33 |
| CDY42473 | Canola | cytosol | 34.75 | 36.3 |
| CDY49723 | Canola | plastid | 36.63 | 36.07 |
| CDX76457 | Canola | plastid | 36.8 | 35.94 |
| CDY09324 | Canola | plastid | 36.29 | 35.56 |
| CDX76471 | Canola | plastid | 36.46 | 35.49 |
| CDY09325 | Canola | plastid | 16.18 | 35.19 |
| Solyc01g101190.2.1 | Tomato | cytosol | 33.05 | 35.14 |
| CDX98659 | Canola | plastid | 36.63 | 34.79 |
| CDX95274 | Canola | cytosol | 7.84 | 34.59 |
| CDY13053 | Canola | extracellular | 32.2 | 34.18 |
| Solyc01g101220.1.1 | Tomato | cytosol | 9.54 | 33.33 |
| CDY54565 | Canola | plastid | 32.54 | 33.22 |
| CDY01639 | Canola | cytosol | 10.9 | 33.16 |
| CDY23121 | Canola | cytosol | 21.47 | 33.16 |
| PGSC0003DMT400079785 | Potato | cytosol | 17.38 | 32.8 |
| PGSC0003DMT400070310 | Potato | cytosol | 17.21 | 32.48 |
| VIT_18s0001g04510.t01 | Wine grape | plastid | 16.7 | 32.03 |
| VIT_18s0001g05460.t01 | Wine grape | cytosol, mitochondrion | 16.18 | 30.65 |
| CDY15827 | Canola | cytosol | 7.67 | 29.03 |
| Os02t0458100-01 | Rice | plastid | 19.08 | 28.64 |
| CDY62515 | Canola | cytosol | 18.23 | 26.68 |
| CDX90785 | Canola | plastid | 26.75 | 26.48 |
| CDY66920 | Canola | cytosol | 14.82 | 26.28 |
| CDY54750 | Canola | cytosol | 17.89 | 26.18 |
| CDY72187 | Canola | cytosol, mitochondrion, nucleus, plastid | 11.07 | 25.9 |
| CDY68676 | Canola | cytosol | 16.52 | 25.8 |
| CDY21487 | Canola | plastid | 25.72 | 25.38 |
| CDX76827 | Canola | plastid | 24.02 | 25.22 |
| CDX83208 | Canola | plastid | 25.38 | 25.04 |
| CDY13587 | Canola | plastid | 24.02 | 23.94 |
| CDX83560 | Canola | plastid | 23.0 | 23.89 |
| CDX83558 | Canola | plastid | 23.68 | 23.6 |
| KRG93110 | Soybean | mitochondrion | 11.75 | 23.31 |
| CDY13589 | Canola | plastid | 21.64 | 22.8 |
| VIT_18s0001g05430.t01 | Wine grape | cytosol | 18.4 | 22.41 |
| CDY68788 | Canola | endoplasmic reticulum, golgi | 15.67 | 21.9 |
| GSMUA_Achr6P24330_001 | Banana | cytosol | 5.11 | 21.28 |
| CDY13590 | Canola | endoplasmic reticulum, extracellular, plastid | 24.53 | 21.08 |
| GSMUA_Achr6P24340_001 | Banana | cytosol | 5.11 | 20.13 |
| CDY61957 | Canola | plastid | 12.61 | 19.58 |
| CDY53129 | Canola | cytosol | 8.52 | 19.53 |
| CDY53648 | Canola | cytosol | 8.52 | 19.53 |
| CDY12910 | Canola | plastid | 4.77 | 18.79 |
| CDY12909 | Canola | cytosol | 7.16 | 18.1 |
Protein Annotations
| Gene3D:1.10.600.10 | Gene3D:1.50.10.130 | MapMan:9.1.4.2 | GO:A0A078CF22 | EnsemblPlants:CDX75776 | ProteinID:CDX75776 |
| ProteinID:CDX75776.1 | ncoils:Coil | GO:GO:0000287 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0010333 | GO:GO:0016829 | EnsemblPlantsGene:GSBRNA2T00123722001 | InterPro:IPR008949 |
| InterPro:IPR036965 | InterPro:Isoprenoid_synthase_dom_sf | PFAM:PF01397 | PFAM:PF03936 | PANTHER:PTHR31225 | PANTHER:PTHR31225:SF22 |
| SUPFAM:SSF48239 | SUPFAM:SSF48576 | InterPro:Terpene_cyclase_like_1_C | InterPro:Terpene_synth_N | InterPro:Terpene_synth_N_sf | InterPro:Terpene_synthase_metal-bd |
| InterPro:Terpenoid_cyclase/PrenylTrfase | UniParc:UPI0004EE81EB | : | : | : | : |
Description
BnaC03g38590D
Coordinates
chrLK031805:-:588845..596024
Molecular Weight (calculated)
67756.2 Da
IEP (calculated)
5.402
GRAVY (calculated)
-0.243
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MESTGSIFGP KNLPNVNRVL LHLKTNVSLF PSRWLHNHTL SLKPEKYHLV CVRATQSNDD LERTRPLVHF SPTLWGDHFL SVPLDVDEFD NLSREIEVTM
101: KPKVRDMLMS FKNRDSERIR LIHLLVNLGI AYHFETEIDE ILNKAFGNVD DIIAQQDDLE TMSTMFELFS LRGYYMSCDA FSRFKGADGK FMESLAEDIR
201: GMLQLYQAAH LGTPSEDIMD EALSFTRHHL ESLTGNHAAN VSPHLSTHIK NALCRARYHN LEMLATREYI SFYGQEEDHN ETLLKFAKLN FNYCQLHYIQ
301: ELKDLTKWWK DIDLSSKLPY FRDRIVEVFF GSLAMYFEPR YSLGRIIVAK LTAVATVFND TCDAYGTLPE VTSLVDAFQR WDLVGTEKLP SYVRIVFGSV
401: FETLEEIEQE MRPGGRSEIV QVVVDEMKKL ARAYLALSKW SSKSHVPTFE DEYMEIGMRT SIDQYAAYSF IAMEDSLNGV FRIVNDISTY EREMKRGEVA
501: TGLNCYMKQH EVTKEEAIEE LNKIAVDYYK IIMEEFLTTT AVPRPVLVRC LNVSRPVDLI YKESDKFTNP GELKDAITSL FIHSIPL
101: KPKVRDMLMS FKNRDSERIR LIHLLVNLGI AYHFETEIDE ILNKAFGNVD DIIAQQDDLE TMSTMFELFS LRGYYMSCDA FSRFKGADGK FMESLAEDIR
201: GMLQLYQAAH LGTPSEDIMD EALSFTRHHL ESLTGNHAAN VSPHLSTHIK NALCRARYHN LEMLATREYI SFYGQEEDHN ETLLKFAKLN FNYCQLHYIQ
301: ELKDLTKWWK DIDLSSKLPY FRDRIVEVFF GSLAMYFEPR YSLGRIIVAK LTAVATVFND TCDAYGTLPE VTSLVDAFQR WDLVGTEKLP SYVRIVFGSV
401: FETLEEIEQE MRPGGRSEIV QVVVDEMKKL ARAYLALSKW SSKSHVPTFE DEYMEIGMRT SIDQYAAYSF IAMEDSLNGV FRIVNDISTY EREMKRGEVA
501: TGLNCYMKQH EVTKEEAIEE LNKIAVDYYK IIMEEFLTTT AVPRPVLVRC LNVSRPVDLI YKESDKFTNP GELKDAITSL FIHSIPL
001: MEATRTSFGL HNAPLCPTTN PSLFPRRWLH KHTLSLKPAK QHHLVCVRAT ESNDNLESSR PLAHFSPTLW GDHFLSVPLH VAEFDDFSRE IEVTMKPKVR
101: DMLKSSKNSD NERIRLIHLL MNLGIAYHFE IEIDEILGQA FGNLDDIIAK ENDLETISTM FEVFRLRGYY MPCYAFNRFK GEDGRFKESL AEDIRGMLQL
201: YEAAHLGTPS EDIMDEALSF TRYRLESLTS NHTATASPHL SKHIQNALYR ARYHNLEILV AREYISFYEQ EEDHDETLLK FAKLNFNYCQ LHYIQELKDL
301: TKWWKELDLA SKLPYIRDRI VEVYFGALAL YFEPRYSLGR IIVTKITMIV TVFNDTCDAY GTLPEVTSLV DSFQRWDLGD IEKLPSYVKI VFRGVFETLE
401: EIEQEMRPQG RSRIVQVAVD EIKKLGKAYL AISKWARASH VPTFEEYMEF GMQTSMDHFA AYSFIAMEDC DENQTCEWYK SRPKMMEALN GVFRIKNDIN
501: TFEQEMSRGE VAKGLNCYMK QHGVSKEEAI GEMNKIYSNY YKIIMEEYLT TTAVPRPILV RCLNVSRPIH HFYKERDEFT DPYFGMLKEV ITSLFIHPIP
601: L
101: DMLKSSKNSD NERIRLIHLL MNLGIAYHFE IEIDEILGQA FGNLDDIIAK ENDLETISTM FEVFRLRGYY MPCYAFNRFK GEDGRFKESL AEDIRGMLQL
201: YEAAHLGTPS EDIMDEALSF TRYRLESLTS NHTATASPHL SKHIQNALYR ARYHNLEILV AREYISFYEQ EEDHDETLLK FAKLNFNYCQ LHYIQELKDL
301: TKWWKELDLA SKLPYIRDRI VEVYFGALAL YFEPRYSLGR IIVTKITMIV TVFNDTCDAY GTLPEVTSLV DSFQRWDLGD IEKLPSYVKI VFRGVFETLE
401: EIEQEMRPQG RSRIVQVAVD EIKKLGKAYL AISKWARASH VPTFEEYMEF GMQTSMDHFA AYSFIAMEDC DENQTCEWYK SRPKMMEALN GVFRIKNDIN
501: TFEQEMSRGE VAKGLNCYMK QHGVSKEEAI GEMNKIYSNY YKIIMEEYLT TTAVPRPILV RCLNVSRPIH HFYKERDEFT DPYFGMLKEV ITSLFIHPIP
601: L
Arabidopsis Description
TPS17Terpenoid synthase 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LRR2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.