CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
PProwler:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P24330_001	Banana	cytosol	31.25	3.55
GSMUA_Achr6P24340_001	Banana	cytosol	31.25	3.36
CDY71184	Canola	cytosol	68.75	3.29
CDX74453	Canola	cytosol	100.0	3.01
AT4G13300.1	Thale cress	cytosol	87.5	2.53
AT4G13280.2	Thale cress	cytosol	81.25	2.35
CDY63249	Canola	cytosol	81.25	2.34
CDX95274	Canola	cytosol	18.75	2.26
PGSC0003DMT400079785	Potato	cytosol	43.75	2.25
PGSC0003DMT400070310	Potato	cytosol	37.5	1.93
CDY66920	Canola	cytosol	37.5	1.81
CDY09324	Canola	plastid	62.5	1.67
CDY69236	Canola	cytosol	50.0	1.65
CDX98661	Canola	cytosol	56.25	1.62
CDY42473	Canola	cytosol	56.25	1.6
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	37.5	1.57
CDY53648	Canola	cytosol	25.0	1.56
CDY53129	Canola	cytosol	25.0	1.56
CDY06577	Canola	cytosol	31.25	1.52
CDX76471	Canola	plastid	56.25	1.49
CDX82478	Canola	cytosol	50.0	1.49
CDX98659	Canola	plastid	56.25	1.46
CDX82475	Canola	plastid	50.0	1.38
CDX75776	Canola	plastid	50.0	1.36
CDX76457	Canola	plastid	50.0	1.33
CDY32356	Canola	plastid	50.0	1.29
Solyc01g101190.2.1	Tomato	cytosol	43.75	1.27
CDY13589	Canola	plastid	43.75	1.26
CDX76827	Canola	plastid	43.75	1.25
CDX83560	Canola	plastid	43.75	1.24
CDX98470	Canola	plastid	43.75	1.2
CDY68962	Canola	cytosol	37.5	1.19
CDY49723	Canola	plastid	43.75	1.17
CDY39119	Canola	plastid	43.75	1.16
CDY39124	Canola	cytoskeleton, cytosol, plastid	37.5	1.07
CDY68676	Canola	cytosol	25.0	1.06
CDY13587	Canola	plastid	37.5	1.02
CDX83558	Canola	plastid	37.5	1.02
CDY21487	Canola	plastid	37.5	1.01
CDY02143	Canola	plastid	31.25	0.9
CDX90785	Canola	plastid	31.25	0.84
CDX83208	Canola	plastid	31.25	0.84
CDX87217	Canola	plastid	31.25	0.83
CDY23121	Canola	cytosol	18.75	0.79
CDY62515	Canola	cytosol	18.75	0.75
CDY54750	Canola	cytosol	18.75	0.75
CDY09325	Canola	plastid	12.5	0.74
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	31.25	0.73
CDY13053	Canola	extracellular	25.0	0.72
CDY68788	Canola	endoplasmic reticulum, golgi	18.75	0.71
CDY41707	Canola	plastid	25.0	0.69
CDY12910	Canola	plastid	6.25	0.67
CDX82477	Canola	plastid	12.5	0.67
CDY15827	Canola	cytosol	6.25	0.65
CDY18347	Canola	cytosol	6.25	0.6
CDY70719	Canola	cytosol	12.5	0.57
CDY01639	Canola	cytosol	6.25	0.52
CDY67821	Canola	cytosol	6.25	0.52
VIT_18s0001g05430.t01	Wine grape	cytosol	12.5	0.41
CDX75775	Canola	plastid	12.5	0.41
CDY14933	Canola	cytosol	12.5	0.41
PGSC0003DMT400050941	Potato	cytosol	6.25	0.4
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	6.25	0.4
CDY54565	Canola	plastid	12.5	0.35
KRG93110	Soybean	mitochondrion	6.25	0.34
VIT_18s0001g04510.t01	Wine grape	plastid	6.25	0.33
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	6.25	0.32
PGSC0003DMT400047124	Potato	cytosol	6.25	0.32
CDY61957	Canola	plastid	6.25	0.26
Os02t0458100-01	Rice	plastid	6.25	0.26
CDX95273	Canola	plastid	6.25	0.24
PGSC0003DMT400075074	Potato	cytosol	0.0	0.0
Solyc01g101220.1.1	Tomato	cytosol	0.0	0.0
VIT_18s0001g04200.t01	Wine grape	cytosol	0.0	0.0
CDY27296	Canola	cytosol	0.0	0.0
CDY12909	Canola	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:CDY14934	EnsemblPlantsGene:GSBRNA2T00084866001	ProteinID:CDY14934	ProteinID:CDY14934.1	UniParc:UPI0004EEE5B9	UniProt:A0A078FPW3
MapMan:35.2	:	:	:	:	:

Description

BnaA02g22760DBnaA02g22760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FPW3]

Coordinates

chrLK032048:+:670756..670806

Molecular Weight (calculated)

1933.5 Da

IEP (calculated)

5.454

GRAVY (calculated)

0.681

Length

16 amino acids

Sequence
(BLAST)

1: MFKEYITTLL VDPIHL

Best Arabidopsis Sequence Match ( AT4G13300.1 )
(BLAST)

001: MESQTKFDYE SLAFTKLSHS QWTDYFLSVP IDDSELDAIT REIDIIKPEV RKLLSSKGDD ETSKRKVLLI QSLLSLGLAF HFENEIKDIL EDAFRRIDDI
101: TGDENDLSTI SIMFRVFRTY GHNLPSSVFK RFTGDDGKFE RSLTEDAKGI LSLYEAAHLG TTTDYILDEA LEFTSSHLKS LLVGGMCRPH ILRLIRNTLY
201: LPQRWNMEAV IAREYISFYE QEEDHDKMLL RLAKLNFKLL QLHYIKELKT FIKWWMELGL TSKWPSQFRE RIVEAWLAGL MMYFEPQFSG GRVIAAKFNY
301: LLTILDDACD HYFSIPELTR LVDCVERWNH DGIHTLEDIS RIIFKLALDV FDDIGRGVRS KGCSYYLKEM LEELKILVRA NLDLVKWARG NQLPSFEEHV
401: EVGGIALTTY ATLMYSFVGM GEAVGKEAYE WVRSRPRLIK SLAAKGRLMD DITDFESDMS NGFAANAINY YMKQFVVTKE EAILECQKMV VDINKIVNEE
501: LLKTTTVPRR VLKQALNFGR LLEVLYTKSD DIYNCSEGKL KEYIVTLLID PIHL

Arabidopsis Description

TPS13(Z)-gamma-bisabolene synthase 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9T0K1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.