CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	nucleus
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra035927.1-P	Field mustard	mitochondrion, plastid	90.68	95.95
CDY02143	Canola	plastid	73.54	79.93
CDY39124	Canola	cytoskeleton, cytosol, plastid	56.41	60.64
CDX82477	Canola	plastid	29.95	60.0
CDY39119	Canola	plastid	58.9	58.8
CDX98470	Canola	plastid	56.91	58.56
CDX82478	Canola	cytosol	52.08	58.29
CDY32356	Canola	plastid	58.24	56.45
CDY67821	Canola	cytosol	17.64	54.64
CDX82475	Canola	plastid	52.41	54.22
CDX75776	Canola	plastid	52.75	54.0
CDY06577	Canola	cytosol	27.62	50.61
CDY27296	Canola	cytosol	16.31	50.26
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	30.95	48.82
CDX75775	Canola	plastid	37.27	46.28
CDY18347	Canola	cytosol	12.65	45.78
CDY68962	Canola	cytosol	35.94	42.86
PGSC0003DMT400050941	Potato	cytosol	17.47	42.0
PGSC0003DMT400075074	Potato	cytosol	14.48	41.83
CDY69236	Canola	cytosol	33.61	41.74
VIT_18s0001g04200.t01	Wine grape	cytosol	8.15	41.18
CDY70719	Canola	cytosol	23.63	40.8
CDX98661	Canola	cytosol	35.94	38.78
CDX95274	Canola	cytosol	8.49	38.35
PGSC0003DMT400070310	Potato	cytosol	19.47	37.62
PGSC0003DMT400079785	Potato	cytosol	19.3	37.3
CDY14933	Canola	cytosol	29.95	36.89
CDY63249	Canola	cytosol	33.94	36.69
CDX74453	Canola	cytosol	32.28	36.53
CDY41707	Canola	plastid	34.94	36.08
CDY42473	Canola	cytosol	33.61	35.94
CDY71184	Canola	cytosol	19.97	35.93
CDY49723	Canola	plastid	35.61	35.91
CDX76457	Canola	plastid	35.44	35.44
Solyc01g101220.1.1	Tomato	cytosol	9.82	35.12
CDY09324	Canola	plastid	34.94	35.06
PGSC0003DMT400047124	Potato	cytosol	18.14	35.05
CDX98659	Canola	plastid	35.77	34.79
Solyc01g101190.2.1	Tomato	cytosol	31.95	34.78
CDX95273	Canola	plastid	24.13	34.61
CDY09325	Canola	plastid	15.47	34.44
CDX76471	Canola	plastid	34.44	34.33
CDY54565	Canola	plastid	32.45	33.91
CDY13053	Canola	extracellular	31.11	33.82
CDY23121	Canola	cytosol	20.8	32.89
CDY01639	Canola	cytosol	10.32	32.12
CDY14934	Canola	cytosol	0.83	31.25
CDY66920	Canola	cytosol	16.97	30.82
VIT_18s0001g04510.t01	Wine grape	plastid	15.14	29.74
CDX90785	Canola	plastid	28.79	29.17
CDY62515	Canola	cytosol	19.3	28.93
CDY68676	Canola	cytosol	17.97	28.72
CDY54750	Canola	cytosol	19.13	28.68
Os02t0458100-01	Rice	plastid	18.64	28.64
CDY21487	Canola	plastid	27.95	28.24
CDX83208	Canola	plastid	27.79	28.07
VIT_18s0001g05460.t01	Wine grape	cytosol, mitochondrion	14.48	28.06
CDY15827	Canola	cytosol	7.15	27.74
CDY53648	Canola	cytosol	11.81	27.73
CDY53129	Canola	cytosol	11.81	27.73
CDX83558	Canola	plastid	26.96	27.5
CDY13587	Canola	plastid	26.79	27.33
CDX76827	Canola	plastid	24.96	26.83
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	10.98	26.29
CDX83560	Canola	plastid	24.13	25.66
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	27.95	24.6
KRG93110	Soybean	mitochondrion	11.98	24.32
CDY13589	Canola	plastid	22.46	24.24
CDY68788	Canola	endoplasmic reticulum, golgi	16.31	23.33
GSMUA_Achr6P24330_001	Banana	cytosol	4.99	21.28
CDY12909	Canola	cytosol	8.15	21.12
VIT_18s0001g05430.t01	Wine grape	cytosol	16.31	20.33
CDY61957	Canola	plastid	12.31	19.58
GSMUA_Achr6P24340_001	Banana	cytosol	4.83	19.46
CDY12910	Canola	plastid	3.99	16.11

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078DDT6	EnsemblPlants:CDX87217	ProteinID:CDX87217
ProteinID:CDX87217.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00146150001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF22	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EF37E9	:	:	:	:	:

Description

BnaC09g05320D

Coordinates

chrLK031849:-:1229247..1231934

Molecular Weight (calculated)

69705.2 Da

IEP (calculated)

5.613

GRAVY (calculated)

-0.224

Length

601 amino acids

Sequence
(BLAST)

001: MHASRMVMSF DPKTLPCAYR VPLCHKAKLS LLPGRLLRNQ TLSRQPTKQD LFCVMATSGD LESIRPLAQF TPTFLGDHLF SVPVDGSEFN AIEHEIESVM
101: KPYVRDMLMS PHTCDKEKIR LIYLLISLAI SHYFEDEIEE ILSKAFGKLE GLIAKEDDLE TICTMFEVFR LYGHKMSCDV FERFSGEHDG KFKESVVRDV
201: RGMLQLYQAS YLKTKDENII EEARSFTRTH LAAVTNTTKP HLSKHIQNAL YIPRYHCVEI AVAREYISFY EQEEDHEENL LKFAKLNFSY CQLHYVKELK
301: DVTKWWKELD LASKLPNTFR DRNVEIYFGM MGIYFEPRYS VARVIGTKIS MIMTVVDDTY DAYGTLPEVI SFTDALQRWD IGTIEDLPNY MQIIFRTLWE
401: VMQDIEREMS SLGRPGGLQP TIDEIKSLTK KGYLEIAKWA RAGHVPNFEE YMEVGIVTGA MDDMAVYSFL GMEDCDEKIM YEWFASRPKV ILAFNVVFRL
501: INDITTFEEE LKRGEVANGV NCYMKQHGVS QEEAVTELKK IIKDHHEMMI DEFFKALSTV PRQIVMRVFN TARVINLFYK EGDGFGHPDE NLKAHFTSLF
601: L

Best Arabidopsis Sequence Match ( AT3G29410.1 )
(BLAST)

001: MEASKCFGPR TLPIIHNVPL CLKTNFSLFP CRLLQSQSLS SKKSTKHYLF RVKAETSGDL ESTRPLTYFS PSYWGDHFLS VSIDDSEFEA LEKEIETVFK
101: PKVRDMLMSP HSSDKERIRL IHLLISLGIA YYYENEIEEI LHKAYGKLAC LISDEDDLET IAIMFEVFRL YGHKMPCDVF ERFKSEDGKF KESLVGDVRG
201: LLQLYEAAHL GAPSEDIMDE ALSFARYHLE PLAGTETSSN LFKHVENVLY RARYHSIEIL VARQYISFYD QEEDQDETLL RFSKLNFNFC QMHYVKELKI
301: VTRWWKELGI ASKLPYSIRE RNVETYLGGL GVLFEPRYSL ARIFLAKLTL IMTVVDDTCD AYATLPEVQS LHDAFHRWDL RAMEELPRYM RIIYQSVFET
401: VEDIDREMIA RGKHGRLQLT IDEIKSLMIW YLGIAKWARS DQVPSFEDYM EIGTPSSALD DFASYGFIAM DDCDQKQLKE WFYSKPKIFH ALNALFRIRN
501: DIVTFEQEMS RGEVANGVNC YMKQHGVTKE AAVEELRKME RESYKIMIEE FMTSKAMPRQ ILVRPVNIAR VMDLFYKEAD GFGHPDQKLL QLIASLFLHP
601: IPL

Arabidopsis Description

TPS25Terpenoid synthase 25 [Source:UniProtKB/Swiss-Prot;Acc:Q9LIA1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.