CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66920	Canola	cytosol	41.32	69.79
CDX83558	Canola	plastid	66.91	63.5
CDY13587	Canola	plastid	66.55	63.16
CDX90785	Canola	plastid	66.37	62.56
CDY53129	Canola	cytosol	28.44	62.11
CDY53648	Canola	cytosol	28.44	62.11
CDX83560	Canola	plastid	62.43	61.77
CDY13589	Canola	plastid	60.64	60.86
CDX83208	Canola	plastid	64.04	60.17
CDY21487	Canola	plastid	63.69	59.83
VIT_13s0067g03770.t01	Wine grape	cytosol	34.88	56.2
VIT_13s0067g00300.t01	Wine grape	cytosol	15.38	54.43
CDY13590	Canola	endoplasmic reticulum, extracellular, plastid	66.37	54.32
CDY15827	Canola	cytosol	15.03	54.19
VIT_13s0067g00090.t01	Wine grape	cytosol	33.09	52.86
VIT_13s0067g00320.t01	Wine grape	cytosol	11.09	52.54
CDY54750	Canola	cytosol	37.03	51.62
CDY62515	Canola	cytosol	36.49	50.87
CDY68676	Canola	cytosol	33.27	49.47
VIT_00s0724g00010.t01	Wine grape	cytosol	36.67	48.01
VIT_00s2271g00010.t01	Wine grape	cytosol	33.63	47.59
VIT_13s0067g03700.t01	Wine grape	cytosol	46.69	46.11
VIT_13s0084g00010.t01	Wine grape	cytosol	45.26	45.92
VIT_13s0067g03740.t01	Wine grape	cytosol	34.35	45.5
Solyc02g079840.1.1	Tomato	cytosol	43.11	44.8
CDY68788	Canola	endoplasmic reticulum, golgi	32.92	43.81
CDY14934	Canola	cytosol	1.25	43.75
GSMUA_Achr4P07690_001	Banana	cytosol	13.24	43.27
PGSC0003DMT400089009	Potato	cytosol	12.34	42.86
CDY72187	Canola	cytosol, mitochondrion, nucleus, plastid	19.14	42.63
VIT_13s0067g00130.t01	Wine grape	plastid	39.18	42.03
VIT_13s0067g00370.t01	Wine grape	plastid	44.36	42.03
VIT_13s0019g00060.t01	Wine grape	plastid	44.01	41.41
VIT_13s0067g03790.t01	Wine grape	plastid	43.47	40.98
VIT_13s0067g03830.t01	Wine grape	plastid	29.34	37.27
PGSC0003DMT400055897	Potato	cytosol	7.51	34.71
KRH22502	Soybean	cytosol	9.66	30.86
CDY12909	Canola	cytosol	11.81	28.45
CDY68962	Canola	cytosol	23.97	26.59
CDY39124	Canola	cytoskeleton, cytosol, plastid	26.48	26.48
CDY69236	Canola	cytosol	22.9	26.45
CDY02143	Canola	plastid	25.76	26.04
CDX87217	Canola	plastid	26.83	24.96
CDX98661	Canola	cytosol	24.69	24.78
CDX98470	Canola	plastid	25.76	24.66
CDY09324	Canola	plastid	26.3	24.54
CDX76457	Canola	plastid	26.12	24.29
CDY12910	Canola	plastid	6.44	24.16
CDX82475	Canola	plastid	25.04	24.1
CDY13053	Canola	extracellular	23.79	24.05
CDY32356	Canola	plastid	26.65	24.03
CDX75776	Canola	plastid	25.22	24.02
CDX82478	Canola	cytosol	22.9	23.84
CDY49723	Canola	plastid	25.4	23.83
CDY06577	Canola	cytosol	13.95	23.78
CDY39119	Canola	plastid	25.58	23.75
CDX95274	Canola	cytosol	5.55	23.31
CDX98659	Canola	plastid	25.76	23.3
CDY61957	Canola	plastid	15.74	23.28
CDY70719	Canola	cytosol	14.49	23.28
CDY23121	Canola	cytosol	15.56	22.89
CDX76471	Canola	plastid	24.51	22.72
CDY67821	Canola	cytosol	7.87	22.68
CDX74453	Canola	cytosol	21.47	22.6
CDY41707	Canola	plastid	23.43	22.51
CDX95273	Canola	plastid	16.82	22.43
CDY18347	Canola	cytosol	6.62	22.29
CDY42473	Canola	cytosol	22.36	22.24
CDY63249	Canola	cytosol	22.0	22.12
CDY27296	Canola	cytosol	7.69	22.05
CDY14933	Canola	cytosol	19.14	21.93
CDY09325	Canola	plastid	10.55	21.85
CDX75774	Canola	cytosol, golgi, mitochondrion, plasma membrane	14.85	21.78
CDY54565	Canola	plastid	22.36	21.74
CDY71184	Canola	cytosol	12.88	21.56
CDX82477	Canola	plastid	10.73	20.0
CDX75775	Canola	plastid	15.03	17.36
CDY01639	Canola	cytosol	5.72	16.58

Protein Annotations

Gene3D:1.10.600.10	Gene3D:1.50.10.130	MapMan:9.1.4.2	GO:A0A078CJA3	EnsemblPlants:CDX76827	ProteinID:CDX76827
ProteinID:CDX76827.1	GO:GO:0000287	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008150
GO:GO:0008152	GO:GO:0010333	GO:GO:0016829	EnsemblPlantsGene:GSBRNA2T00127333001	InterPro:IPR008949	InterPro:IPR036965
InterPro:Isoprenoid_synthase_dom_sf	PFAM:PF01397	PFAM:PF03936	PANTHER:PTHR31225	PANTHER:PTHR31225:SF16	SUPFAM:SSF48239
SUPFAM:SSF48576	InterPro:Terpene_cyclase_like_1_C	InterPro:Terpene_synth_N	InterPro:Terpene_synth_N_sf	InterPro:Terpene_synthase_metal-bd	InterPro:Terpenoid_cyclase/PrenylTrfase
UniParc:UPI0004EE0BDC	SEG:seg	:	:	:	:

Description

BnaC08g34130D

Coordinates

chrLK031808:-:1313107..1316378

Molecular Weight (calculated)

64823.1 Da

IEP (calculated)

6.212

GRAVY (calculated)

-0.390

Length

559 amino acids

Sequence
(BLAST)

001: MSTLCIGSTH IYHNALRLSP TSRSPRRLAW TSVKTKTVAA TVDTLRGSAN YEPSRWDHEF LLSLENIYVK RANCVRDRDF LKEKVRKVLD ETTTPLEQLE
101: LVDKLQRLGV SYHFESKIDN ILTDFYHNNV RECGKEDLHA TALKFRLLRE HGFNVSEGIF DVFINKIEDG TFESDDIRGL ISVYEASPDH NTYDVNVLEM
201: AVEALEMPYH WRMKRLETRR YIDAYSKHDV LIEFAKIDFN IVQAVHQEEL KYLSSWWKET GLSNQLHFAR DRIVENYFWT VGQIQEPQFG YVRRVITKIN
301: ALITTIDDIY DVYGTLDELQ QFTAIVENWD VNRLDELPEY MKLCYLVLYN ETNSIGRDIL KDKNINVIPF LKKSWGDLCK AYLVEAKWHK KKHKPSVEEY
401: MQNAWISISA PTILAHFYCV FSDKISSQVL ETLSRHQQHV VRCSAIVLRL ANDLGTSPDE LKRGDVLKSV QCYMNETGAS EEKSRAYVED MISNTWNEMN
501: NEIISHDSSL LPRGFVEAAI NLARMSQCMY QYGDGHGSPE KAKTVDRILS TLVNPIPLD

Best Arabidopsis Sequence Match ( AT2G24210.1 )
(BLAST)

001: MATLLQIGSG VIYSNALRKT LRRPQSSTCI IVTETTPCNK SPTVQRRSAN YQPSRWDHHH LLSVENKFAK DKRVRERDLL KEKVRKMLND EQKTYLDQLE
101: FIDDLQKLGV SYHFEAEIDN ILTSSYKKDR TNIQESDLHA TALEFRLFRQ HGFNVSEDVF DVFMENCGKF DRDDIYGLIS LYEASYLSTK LDKNLQIFIR
201: PFATQQLRDF VDTHSNEDFG SCDMVEIVVQ ALDMPYYWQM RRLSTRWYID VYGKRQNYKN LVVVEFAKID FNIVQAIHQE ELKNVSSWWM ETGLGKQLYF
301: ARDRIVENYF WTIGQIQEPQ YGYVRQTMTK INALLTTIDD IYDIYGTLEE LQLFTVAFEN WDINRLDELP EYMRLCFLVI YNEVNSIACE ILRTKNINVI
401: PFLKKSWTDV SKAYLVEAKW YKSGHKPNLE EYMQNARISI SSPTIFVHFY CVFSDQLSIQ VLETLSQHQQ NVVRCSSSVF RLANDLVTSP DELARGDVCK
501: SIQCYMSETG ASEDKARSHV RQMINDLWDE MNYEKMAHSS SILHHDFMET VINLARMSQC MYQYGDGHGS PEKAKIVDRV MSLLFNPIPL D

Arabidopsis Description

TPS10Tricyclene synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9ZUH4]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.